LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g2915	ATGGATTCAGCGAGGAGTTGGTTTCATAAGTTTCAACCGCGGGATAGACTGAGAGCTTCAACGAGGAAGAAGGATGATGGTAATGGCGTGATAGATGATGCCAATGCGGTTGTTGATGAGACGGATCTTTCCAATGTTACCAAGCAGAAGGTTGCTGCTGCTAAGCAATATATCGAGAATCATTATAAAGAACAAATGAAGAATCTTCAAGAGAGAAAAGAACGTCGAACTGTCTTAGAAAAGAAGTTGGCTGATGCTGATGTCTCCGAGGAAGATCAAAATAACTTACTTAAATATTTAGCGAAGAAGGAAACCGAATATATGCGTCTTCAAAGGCATAAAATGGGTGTTGAGGATTTTGAGATGTTAACTATGATTGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGCAGGGAAAAGACTACAGATCATGTATATGCAATGAAAAAGCTAAAGAAATCGGAGATGCTTCGAAGAGGCCAGGTAGAACATGTCAGATCTGAGAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATCGTCAAACTTTATTGTTCTTTCCAGGATGATGAGTATTTATATCTTATTATGGAGTATCTACCGGGAGGGGATATGATGACTCTTCTTATGAGAAAGGATACATTAACCGAAGACGAAGCCCGATTTTATGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATTAAACCTGATAACTTATTACTTGATAAATATGGACACTTGAAACTATCGGATTTTGGACTATGTAAACCGTTAGACTGTAGTGTACTTGAAGAATCAGACTTTTCTATTGGCCAGAATGCAAATGGAACAACACAAAATGATGATCGTGCATTTCCAAAACGTACACAACAAGAACAGTTGGAAAACTGGCAGAAAAATAGGAGGACACTTGCTTATTCTACCGTTGGTACACCAGATTATATTGCTCCGGAAGTTTTGTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAGTCTCACTTAAAGTTTCCCGAAGAAGCAAGGCTATCTCCGGAGGCCACAGATCTTATAAGTAAGCTTTTGTGTAATGTCAACCAAAGGTTGGGGTCAAATGGTGCGGTTGAAATAAAGTCTCATCCATTCTTTGAAGGTGTTCAATGGGAAAAGTTGTATCAAATGGAAGCTGCATTTACTCCTGAAGTAAACGACGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACAGCCAGACACATTCATCGTCAAGATCAGGTGGTCCATGGAGAAAGATGCTTTCATCAAAGGACATAAATTTTGTTGGATATACATACAAGAACTTTGAAATTGTTAACGACTATCAAGTTCCTGGGATGGCTGAGTTGAAGAAAACCTCCAAATCGAAGAGGAAGCCATCTGTCAAGTCGTTGTTTGATGGTGCGTTGGAGACTTCTGAGGTGTCTGATACTTCAGAAGTGTCTGCAAGCAATCCACCTACTAAATGA	1617	0.3908	MDSARSWFHKFQPRDRLRASTRKKDDGNGVIDDANAVVDETDLSNVTKQKVAAAKQYIENHYKEQMKNLQERKERRTVLEKKLADADVSEEDQNNLLKYLAKKETEYMRLQRHKMGVEDFEMLTMIGKGAFGEVRVCREKTTDHVYAMKKLKKSEMLRRGQVEHVRSERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSVLEESDFSIGQNANGTTQNDDRAFPKRTQQEQLENWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEATDLISKLLCNVNQRLGSNGAVEIKSHPFFEGVQWEKLYQMEAAFTPEVNDELDTQNFEKFEESDSQTHSSSRSGGPWRKMLSSKDINFVGYTYKNFEIVNDYQVPGMAELKKTSKSKRKPSVKSLFDGALETSEVSDTSEVSASNPPTK*	539

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g2915	538	Pfam	Protein kinase C terminal domain	437	482	IPR017892	GO:0004674\|GO:0005524\|GO:0006468
	Mtr7g2915	538	CDD	STKc_NDR_like	118	483	-	-
	Mtr7g2915	538	ProSiteProfiles	AGC-kinase C-terminal domain profile.	419	492	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Mtr7g2915	538	ProSitePatterns	Protein kinases ATP-binding region signature.	126	149	IPR017441	GO:0005524
	Mtr7g2915	538	MobiDBLite	consensus disorder prediction	520	538	-	-
	Mtr7g2915	538	Coils	Coil	62	82	-	-
	Mtr7g2915	538	Gene3D	Phosphorylase Kinase; domain 1	118	447	-	-
	Mtr7g2915	538	SMART	pkinase_C_6	419	484	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Mtr7g2915	538	PANTHER	SERINE/THREONINE-PROTEIN KINASE	20	522	-	-
	Mtr7g2915	538	SUPERFAMILY	Protein kinase-like (PK-like)	93	465	IPR011009	-
	Mtr7g2915	538	SMART	serkin_6	120	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g2915	538	ProSiteProfiles	Protein kinase domain profile.	120	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g2915	538	Gene3D	Transferase(Phosphotransferase) domain 1	204	436	-	-
	Mtr7g2915	538	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	239	251	IPR008271	GO:0004672\|GO:0006468
	Mtr7g2915	538	Pfam	Protein kinase domain	121	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g2915	538	MobiDBLite	consensus disorder prediction	500	538	-	-
	Mtr7g2915	538	PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE	20	522	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g2915	Mtr-Chr7	45930992	45937469	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g2915	1	512	AGC Kinase Gene Family	AT1G03920	77.486	0.0	842

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Mtr7g2915		Pkinase	1.3e-64	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g2915	K08790		-	gmx:100783286	947.577

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr7g2915	7	45930992	45937469	Mtr7g2915	7	45930992	45937469	ECH
	Mtr7g2915	7	45930992	45937469	Mtr1g1348	1	16281569	16287131	PCT
	Mtr1g2379	1	34319906	34330392	Mtr7g2915	7	45930992	45937469	PCT