Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2913 ATGGGTTTGAGAGACATAGGAGCTTCACTACCTCCTGGATTTCGGTTTTATCCAAGTGATGAGGAATTGGTTTGTCACTATCTTTACAAAAAGATCACAAATGAGGAAGTTCTTAAGGGTACTTTGATTGAAATTGACCTTCACATATGTGAACCATGGCAACTTCCAGAGGTGGCAAAGCTTAATGCAAATGAATGGTATTTCTTTAGCTTCCGGGACCGCAAATATGCAACTGGATTTAGAACAAACAGAGCAACTATATCTGGGTATTGGAAAGCAACTGGGAAAGATCGTATGGTGTTAGATCCAATCACACAAGAGGTTGTAGGGATGAGGAAGACATTGGTGTTCTATAGGAATAGAGCTCCAAATGGTATCAAAACAGGGTGGATTATGCATGAATTTCGCTTAGAGACACCACACATGCCTCCTAAGGAGGACTGGGTATTGTGTAGAGTCTTTCACAAAAGCAAAGAAGAGAACAACAACAACAATAATAGTTCCAAACTCAACACACAACAATTCATGTATGAGACAACACCTCCATCCCTAACTTTGATGTCATCATCTCCAACAAATTACCAAACCATCCCTAGTGGCTATAACAAACTTGATTCTTTTTCTTCCCCCATGACAACACTTCATCATTTAAATCCAAACCAAAACAATTCTTCCATGATGAATCTCCTTCAATATTCACGTGAAACAAATCCAAATGATAATAGCACGGTTACTCAAATTAGTTCCAAAGGTGATGATGGATATGGATTCTTGTGGAACATGGATTTGGAAGAAAATAGCCTAGAAGATGGTGTGGCTTCAAACTTGGACGCAATAAGATTTGAGGTTGATGATGATAATGTGGTCTTACTATAA 876 0.3858 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEVLKGTLIEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATISGYWKATGKDRMVLDPITQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEENNNNNNSSKLNTQQFMYETTPPSLTLMSSSPTNYQTIPSGYNKLDSFSSPMTTLHHLNPNQNNSSMMNLLQYSRETNPNDNSTVTQISSKGDDGYGFLWNMDLEENSLEDGVASNLDAIRFEVDDDNVVLL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2913 291 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Mtr7g2913 291 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 285 - -
Mtr7g2913 291 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Mtr7g2913 291 Gene3D NAC domain 19 162 IPR036093 GO:0003677|GO:0006355
Mtr7g2913 291 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 285 - -
Mtr7g2913 291 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2913 Mtr-Chr7 45883089 45887979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2913 6 247 NAC Transcription Factor Family AT1G56010 45.200 1.29e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g2913 NAM 1.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2913 - - gmx:100782751 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2913 7 45883089 45887979 Mtr7g2913 7 45883089 45887979 ECH
Mtr7g2913 7 45883089 45887979 Mtr1g2386 1 34406210 34410339 PCT