Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2912 ATGAGATTTTCCTCGGTTCCGCCTGGTTTTGCATCCCTAACATCTTTTTATCTGAAAAGGGACGACAATGTTAAGTCGGACCCAATCACCACATCGACTAAACCTGAGATGGATGACAATACTTCGTATAAACAGATTTGTACACAACGGCCATGGATAATATCCGACGAGAGCAAGTGCAAACCTGAGGAATCTCACACAGAGCATCCTCCTATGACTAAATTGAAACCCCCTACAAAGTCTTCTCTTCCAAAAGGGACCAAATATGGATGTCCAAAATGCAGTAATTGTTTTAAGGTAACAGCAAGATGGCATCCTGAGGATGCAAGAAGAGAAGTTCTAGAAGAAGCTCCTATTTTCCGTCCAACAGAAGAGGAATTCAAAGACACGCTTAACTATATCGCGAGCATACGTTCCGAAGCAGAACCTTATGGAATTTGCCGTATTGTCCCTCCTGCTAGCTGGAAACCGCCATGTAGTCTTGAAAAAAAGAATGTATGGGAAAACTCTGAATTTGTTGCTCAAATTCAGCGAATTGATGGGCACCAAGTTCAGTATGCACCAGAAGTTGTGACTAGCTCTCATGATACTACAGAAACCAAGAGAAGAAAAGTGATGAAAGTAGCCATGGACTCTCATCTTGGTAATAAAAGTACTTGCACCCCTAATAATGGGAAGGTTAAAGACTGTGACAAGGAGCCTGAACCTGGTCCTAAATTTAGTCTCAAAACTTTTAAGAAATTGGCAGATGAATTCAAGATCCAGTACTTCAACCATAAGGATAAGAACAAGATTATGGGTTCTGGTAAAAATTCAGCCAGACATCAACAGCAATGGGAGCCATCTGTTGAGAATATTGAGGATGAATACGGACGAATTGCTCAAAATCCAACTGAAGAAATTGAGGTTCTCTGCGGTGACACTTTGGAGGCTGGAGATTTTAGCAGTGGATTTCCAATTCCAGCGATTTCTGATTCTCTGAATGCATGCACTTATCCTGAATATTTGAAATCTGGATGGAACTTAAATAATATGCTTTCACTCCCAGGTTCCCTTCTTTCCTTTGAAAGCCCTGAAGCTGCACAGAAATTTTCCCCTAGGGTACATGTGGGAATGTGCTTTTCACCGCTCAAATGGAAAGTTGAAGAGCGCCAATTAGACTCATTATGTTACATGCATTTGGGTGAACCCAAAGTATGGTATGGTGTCCCAGGAAGATGTTCTGTTGACTTTGAAACAATTTGGAAGAAGTATCTCGTTGGAGCGCGAGATATGTATGCAGGACAGCCAGATATGCATGATAATCTGGTTATGCAGTTATCCTGCTCAGTATTGAAGGGAGAGGGTATACCAGTGTATCGGTGTATTCAGTATCCTCGTGAGTTTGTTCTTGTCTTTCCTGGAACATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAAGCAGCAAGTTTTGCTCCTCTTGAGTGGTTGCTTCATGGACAGAATGTTGTAGACTTATATAGTGAACAGAAGAGAAAAACTTTAATTTCATACGACAAACTGTTACTGGGAGCAGCTAGGGAAGCTGTGAGGACCCGATGGGAAACCGATATATGTATGAAGAGCACGCCTGACAACATAACATGTAAAGATGCCTATCAAAGAAATGGGATCTTGTCAAAAGCTTTTAATTCTCGTATCAGGAGTGAAAGTTTGAAGAGGAAATTTATTTCCACTTCTTTGAAGTCACAAAAGATGGATGAAAACTTCACTGCCAGTTGTAAAAGGGAATGTAGCGTATGTCTGCGTGATTTATTCCTGTCTGCTGTTGGTTGTCCGTGCTCAGATGACAAGTTTGTGTGTCTTGATCATGCAAAACAGCTTTGTTCTTGTCCTTGGACAGGCAGAATTCTCCTTTACCGTTATGAAATCAGTGAATTGGAGGTTCTTCATCAAGCTTTGGATGGAAAACTAAGTGCAGTCTATAAATGGGCCAAAGAAGATCTTGGTTTAACTGTGCGCTCAGTTGCCTCCCAGAAATCAAAACTAACCCCAGAAAAAGTAAATGATTCAGAAGACTCGGTAAAAGAACCTATATTGCAGTCAGCGCGGGATGCATACAACAAGTGGAAACAGCGTAAATCACAGGCAACACCAAATTCTTTGGTGGAGAAACAGAGCGAAATGGCCTTCCAAGCCAAGCGGACCCCTGGTAGTATTCACAGTAGTCGGTACGCCATTCACCCAAAAAAGAACACAACTTTACTTCATTCAGCAATATCAAATGATGTCAAAGCTAAAGAGAAAATGGTGGGGACCAAATCTGCTGCAACAAGCATTGGTAAAGGAAGTAATTCTGCCGGGATCAAACCTGATAGCAAGGCAATTGAGGATAAGCTCACAATTTCAAAGAAAGTAGGAGACCCAAAAGTTTCTGAAGTTTCTTCATCAACTCCAGGCTCGCGTTTCTTGTCTTTACTACAAGAGAACATTTGGATTGATGTTTCGTCTAGTTCTTCAGAATCCGATGAGGACTAG 2523 0.4138 MRFSSVPPGFASLTSFYLKRDDNVKSDPITTSTKPEMDDNTSYKQICTQRPWIISDESKCKPEESHTEHPPMTKLKPPTKSSLPKGTKYGCPKCSNCFKVTARWHPEDARREVLEEAPIFRPTEEEFKDTLNYIASIRSEAEPYGICRIVPPASWKPPCSLEKKNVWENSEFVAQIQRIDGHQVQYAPEVVTSSHDTTETKRRKVMKVAMDSHLGNKSTCTPNNGKVKDCDKEPEPGPKFSLKTFKKLADEFKIQYFNHKDKNKIMGSGKNSARHQQQWEPSVENIEDEYGRIAQNPTEEIEVLCGDTLEAGDFSSGFPIPAISDSLNACTYPEYLKSGWNLNNMLSLPGSLLSFESPEAAQKFSPRVHVGMCFSPLKWKVEERQLDSLCYMHLGEPKVWYGVPGRCSVDFETIWKKYLVGARDMYAGQPDMHDNLVMQLSCSVLKGEGIPVYRCIQYPREFVLVFPGTYHSGFDCGFNCSEAASFAPLEWLLHGQNVVDLYSEQKRKTLISYDKLLLGAAREAVRTRWETDICMKSTPDNITCKDAYQRNGILSKAFNSRIRSESLKRKFISTSLKSQKMDENFTASCKRECSVCLRDLFLSAVGCPCSDDKFVCLDHAKQLCSCPWTGRILLYRYEISELEVLHQALDGKLSAVYKWAKEDLGLTVRSVASQKSKLTPEKVNDSEDSVKEPILQSARDAYNKWKQRKSQATPNSLVEKQSEMAFQAKRTPGSIHSSRYAIHPKKNTTLLHSAISNDVKAKEKMVGTKSAATSIGKGSNSAGIKPDSKAIEDKLTISKKVGDPKVSEVSSSTPGSRFLSLLQENIWIDVSSSSSESDED* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2912 840 ProSiteProfiles JmjN domain profile. 117 158 IPR003349 -
Mtr7g2912 840 PANTHER LYSINE-SPECIFIC DEMETHYLASE 60 759 - -
Mtr7g2912 840 SMART cupin_9 334 503 IPR003347 -
Mtr7g2912 840 SMART JmjN_1 116 157 IPR003349 -
Mtr7g2912 840 Pfam JmjC domain, hydroxylase 368 486 IPR003347 -
Mtr7g2912 840 Gene3D Cupin 102 487 - -
Mtr7g2912 840 MobiDBLite consensus disorder prediction 59 85 - -
Mtr7g2912 840 MobiDBLite consensus disorder prediction 214 235 - -
Mtr7g2912 840 ProSiteProfiles JmjC domain profile. 337 503 IPR003347 -
Mtr7g2912 840 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 60 759 - -
Mtr7g2912 840 MobiDBLite consensus disorder prediction 59 73 - -
Mtr7g2912 840 SUPERFAMILY Clavaminate synthase-like 236 529 - -
Mtr7g2912 840 MobiDBLite consensus disorder prediction 770 789 - -
Mtr7g2912 840 Pfam jmjN domain 118 151 IPR003349 -
Mtr7g2912 840 Pfam C5HC2 zinc finger 593 643 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2912 Mtr-Chr7 45867802 45874953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2912 5 811 JUMONJI Transcription Factor Family AT1G08620 42.143 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr7g2912 JmjC 2e-29 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2912 - - gmx:100804864 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2912 7 45867802 45874953 Mtr7g2912 7 45867802 45874953 ECH