Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2909 ATGCATACAGGTCAAATGGATCTAACTTCAGCGAAATGTGTCCTCAACAGTATTTCTCGGTTAATTCATCTAGTTTCTTGCCAAGCAGTTAAGCCTGTGCCCCTTCAGAAGAACTGTAATAATATGGTTGCCGCGTTGAGGTGTTTAAAACCAGTCCTTGACGATGTTGTGGATTACAAAATCCCTTTAGATGAAAATCCGTATAGAGAATGTGATGAATTGGATATACAGGTTAATGAAGCTAGGGAGTTCGTTGAGAAATGGAGCCCAAAGACGAGCAGGATCCATAGTGTTCTTCAAAGTGGGGAATTGTTAATAAAGTTACAGAGCACTTCAGTTAGGATATGTCACATGATTTATAGATCCTCAAAGTCAACTTCATCTGCCTCGGTTTTGGATAATCTTCAGCACCATATACAGGAACTTCAGTCTCTGGAGAAAGAATCAGCTACGCTCTATATAGAAGAAGCACTGAGAAATCAAAAGGATAATAGTAAACCTTGCTATGAAAGTCTAGGGGAAATTATAGAGCTACTTAAATTGACATCAAACCAGGAGCTTCTGAAAGAAAGTATTGCTGTGGAAAAGGAAAGGTTGAATGCGGAAGTCAACAAAACAAAAGGGGAGTTGGATAAAATTAACCAAATTGTGAATCTTTTGTGCAGTTTACGTGATTATCTGATGAAAGCTAAATGCCCTGAAGTCAAAAGTGGTGTCTCAGTCCCACCATACTTTCGATGCCCTTTATCGCTCGAACTCATGTTGGATCCTGTTATTGTGGCTTCAGGTCAAACATACGAGAGGCAGTCCATCCAAATGTGGCTTGATCATGGGCTGAATGTTTGTCCCAAGACTCACCAGAGACTAACTCATGCAAATCTTATTCCCAATTATACTGTTAAAGCTATGATTGCAAATTGGTGTGAAGAAAATAACGTCGATCTTCCTAGTAACTCAAACCAGAGTAATTCTACCCAGAGTTCACCCCCCTCAGATTATCTATTGCATCAAGATTTAGATCGTGTCTGTAGTTTTGGGTCTTCACATAGTAGCAATTCCAATTCAAAATCATCTCTTCAAACTGCAAATTCATTTGAGAAGCAAAACGGTGACAACTCTTCCAGATTAAGTGGTGAATCCAATAGATGTCAGAGTGGTGACACGGAAAAGTTTGAGCAGCAATCTCTTGCTCCTTCGTGTAGTCACAGCAGAAGTGAATCATTTTCAAGTTCTATTTCTAGTACAGATTATGTACCTTCTGTTTCAAAAAAGGTGCCAGGGATACCACATAAGCATCAACATGCGCTGTTATCTGGAGAAATTACTAATAATGTTTTTCCTGCTTCTCCTGCATATAAAGAATATGGGAATTTTCCAACTGTATCACGAGAGCAATTTGAAAGTCCTGGATTAAAAAATGCAAAAATGGAGAACGAAAATAAGTACAATAACAATAATAATATTGTTATTACTAGCCAATCAAATGATGCCAGCCCTGTTTTCAACTCGGAGCATGATAAATTGACCACCGCATCTCATGTCAGTAAGTTGATCGAAGATCTACAGAGTCAATCAAATGAAACAAAATCTGCTGCTGCTGAAGAATTGCGTCTCCTTACCAAGCATAACATGGAAAACCGTATCATTGTAGGGCAATGTGGGACTATCACGCATTTACTTCCACTGCTATCTTCAAACACGAAGATAACGCAAGAGCATGCTGTGACAGCTATACTAAACTTGTCGATAAACGAAGACAACAAGACTTTGATTATGGAAGCAGGAGCTATAGAACCACTTATCCATGTTTTGAAGTCAGGAAATAACGGTGCCAAGGAAAATTCTGCTGCTACTCTATTCAGCCTCTCAGTACCAGAAAACAATAAGGCAAACATTGGTCGTTCTGGTGCTGTTAAAGCTTTGGTGGAACTTCTAGCTTCTGGAACTCTTAGGGGGAAGAAAGATGCTGCAACTGCTTTATTTAACCTATCAATATTTCATGAGAATAAAGCTCGGATAGTTCAAGCTGGAGCGGTGAAGTTTCTGGTTATGCTATTGGACCCTGCAGATGGAATGGTTGACAAGGCTGTTGCTCTTTTGGCAAACCTATCGACAATCCCAGAGGGTCGGGTAGAAATTGTACGGGAAAGGGGAATCCCCTTTTTGGTTGAACTTGTGGAATCAGGTTCTCAGAGGGGAAAGGAAAATGCTGCGTCCATTCTCTTGCAACTAAGCCTTCACAGCCGTAAGTTTTGTACCTTGATTCTTCAGGAAGGAGCTGTACCTCCTGTAGTTGCATTGTCTCAGTTTGGTACACCAAGAGCAAAGGAAAAGGCACAACAGCTTCTCAGTCATTTTCGTAGTCAGCGTGAAGGAGCTTCCGGAAGGGGAAAATCATGA 2400 0.4037 MHTGQMDLTSAKCVLNSISRLIHLVSCQAVKPVPLQKNCNNMVAALRCLKPVLDDVVDYKIPLDENPYRECDELDIQVNEAREFVEKWSPKTSRIHSVLQSGELLIKLQSTSVRICHMIYRSSKSTSSASVLDNLQHHIQELQSLEKESATLYIEEALRNQKDNSKPCYESLGEIIELLKLTSNQELLKESIAVEKERLNAEVNKTKGELDKINQIVNLLCSLRDYLMKAKCPEVKSGVSVPPYFRCPLSLELMLDPVIVASGQTYERQSIQMWLDHGLNVCPKTHQRLTHANLIPNYTVKAMIANWCEENNVDLPSNSNQSNSTQSSPPSDYLLHQDLDRVCSFGSSHSSNSNSKSSLQTANSFEKQNGDNSSRLSGESNRCQSGDTEKFEQQSLAPSCSHSRSESFSSSISSTDYVPSVSKKVPGIPHKHQHALLSGEITNNVFPASPAYKEYGNFPTVSREQFESPGLKNAKMENENKYNNNNNIVITSQSNDASPVFNSEHDKLTTASHVSKLIEDLQSQSNETKSAAAEELRLLTKHNMENRIIVGQCGTITHLLPLLSSNTKITQEHAVTAILNLSINEDNKTLIMEAGAIEPLIHVLKSGNNGAKENSAATLFSLSVPENNKANIGRSGAVKALVELLASGTLRGKKDAATALFNLSIFHENKARIVQAGAVKFLVMLLDPADGMVDKAVALLANLSTIPEGRVEIVRERGIPFLVELVESGSQRGKENAASILLQLSLHSRKFCTLILQEGAVPPVVALSQFGTPRAKEKAQQLLSHFRSQREGASGRGKS* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2909 799 MobiDBLite consensus disorder prediction 345 420 - -
Mtr7g2909 799 SMART arm_5 543 583 IPR000225 GO:0005515
Mtr7g2909 799 SMART arm_5 584 624 IPR000225 GO:0005515
Mtr7g2909 799 SMART arm_5 666 705 IPR000225 GO:0005515
Mtr7g2909 799 SMART arm_5 706 746 IPR000225 GO:0005515
Mtr7g2909 799 SMART arm_5 625 665 IPR000225 GO:0005515
Mtr7g2909 799 ProSiteProfiles U-box domain profile. 240 314 IPR003613 GO:0004842|GO:0016567
Mtr7g2909 799 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 595 637 IPR000225 GO:0005515
Mtr7g2909 799 SUPERFAMILY RING/U-box 239 315 - -
Mtr7g2909 799 Coils Coil 189 216 - -
Mtr7g2909 799 Gene3D - 457 588 IPR011989 -
Mtr7g2909 799 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 315 IPR013083 -
Mtr7g2909 799 Gene3D - 589 794 IPR011989 -
Mtr7g2909 799 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 11 794 - -
Mtr7g2909 799 Pfam U-box domain 241 312 IPR003613 GO:0004842|GO:0016567
Mtr7g2909 799 PANTHER U BOX DOMAIN-CONTAINING 11 794 - -
Mtr7g2909 799 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 677 718 IPR000225 GO:0005515
Mtr7g2909 799 Pfam Armadillo/beta-catenin-like repeat 627 664 IPR000225 GO:0005515
Mtr7g2909 799 Pfam Armadillo/beta-catenin-like repeat 584 623 IPR000225 GO:0005515
Mtr7g2909 799 Pfam Armadillo/beta-catenin-like repeat 545 582 IPR000225 GO:0005515
Mtr7g2909 799 Coils Coil 128 155 - -
Mtr7g2909 799 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 636 678 IPR000225 GO:0005515
Mtr7g2909 799 SMART Ubox_2 244 307 IPR003613 GO:0004842|GO:0016567
Mtr7g2909 799 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 554 596 IPR000225 GO:0005515
Mtr7g2909 799 CDD RING-Ubox_PUB 245 287 IPR045210 -
Mtr7g2909 799 SUPERFAMILY ARM repeat 512 786 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2909 Mtr-Chr7 45829798 45835322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2909 6 799 U-box Gene Family AT3G54790 51.940 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2909 - - mtr:MTR_7g097020 1402.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2909 7 45829798 45835322 Mtr7g2909 7 45829798 45835322 ECH