Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2900 ATGGGAAGAGCTCCATGCTGTGAGAAAATGGGGTTGAAGAAAGGGCCATGGACTACAGAAGAAGATCGAATCCTCATCAATCACATAAACACTTATGGTCATTCCAATTGGCGTGCTCTTCCCAAACAAGCTGGATTGCTACGGTGTGGAAAGAGTTGCAGATTACGATGGGCAAATTATCTGAAGCCGGATATCAAAAGAGGTAACTTCACCAAAGAAGAAGAGGATGCAATAATCAATTTGCATCAAACGTTAGGAAACAGATGGTCAACTATTGCAGCAAGATTACCCGGACGAACAGATAACGAGATAAAAAATGTATGGCACACCCATTTGAAGAAAAGGCTGCCACAAAACCAACATGAACACAACAACAGCACAAAACGAAACAAAAAACAAACCAAGTTGGACTTTCATGTCGACGCCTCCAAATCAGACCAAGACACCAAACAAGAACAACATCATGAGGATGATAGGCCACAATGTTCTAGTGACATGTCATCACATAATAATAGTAGCATTGCTACTTCAAATAATGATAATGATATATCTATAAGTTACAATAATATCAACAATAATAATGATGTTGTTGATTCGGCAGAAAATAATTTTGCATTGGATGATGATTTTTGGTGTGAAGTTTTGTCATCCGATAATTCTAGCATTGAGACAAGTGGTGTTATGGACATTGGTGTTGATAATTATCAATTTCAAGCTCCATTAGGAACTGAAGAAGGAGTTTTTGATTCTAGTTCATTGAGTTTATGCCAAGATATGGACTTCTGGCATGATGTTTATGCGAGAGCTGAGGAAATAACGGAGTTACTAGAATTATGA 837 0.3787 MGRAPCCEKMGLKKGPWTTEEDRILINHINTYGHSNWRALPKQAGLLRCGKSCRLRWANYLKPDIKRGNFTKEEEDAIINLHQTLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLPQNQHEHNNSTKRNKKQTKLDFHVDASKSDQDTKQEQHHEDDRPQCSSDMSSHNNSSIATSNNDNDISISYNNINNNNDVVDSAENNFALDDDFWCEVLSSDNSSIETSGVMDIGVDNYQFQAPLGTEEGVFDSSSLSLCQDMDFWHDVYARAEEITELLEL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2900 278 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr7g2900 278 CDD SANT 69 112 IPR001005 -
Mtr7g2900 278 MobiDBLite consensus disorder prediction 164 180 - -
Mtr7g2900 278 CDD SANT 16 61 IPR001005 -
Mtr7g2900 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr7g2900 278 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mtr7g2900 278 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr7g2900 278 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr7g2900 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr7g2900 278 SMART sant 13 63 IPR001005 -
Mtr7g2900 278 SMART sant 66 114 IPR001005 -
Mtr7g2900 278 PANTHER TRANSCRIPTION FACTOR MYB15 1 275 - -
Mtr7g2900 278 MobiDBLite consensus disorder prediction 113 180 - -
Mtr7g2900 278 MobiDBLite consensus disorder prediction 113 163 - -
Mtr7g2900 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 275 - -
Mtr7g2900 278 Gene3D - 11 67 - -
Mtr7g2900 278 Gene3D - 68 143 - -
Mtr7g2900 278 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2900 Mtr-Chr7 45783952 45786850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2900 1 278 MYB Transcription Factor Family AT2G31180 48.057 8.17e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g2900 Myb_DNA-binding 3.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2900 K09422 - gmx:100775603 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2900 7 45783952 45786850 Mtr7g2900 7 45783952 45786850 ECH
Mtr7g2900 7 45783952 45786850 Mtr1g1366 1 16543301 16545310 PCT