Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2894 ATGGATTTTGATTCTCTTCTCTTCCAAAACCAAAATCAAAACCTTATGTACTTCCCTAATAATTTCTCTTGGGAACTAGAAGAAGATTTTGTTAACTTCTTTAGTGATGTCAACAACTACTCAAACTCTTCTGGATCATTATCATCAACGGAATCAAACTCTTCTGGATCCGTACTAAGCAATGAACCACTAGAAGTTTCATCAAATACCACTTATAAACAAGTGATCAAAGAGACACAAACATCATCACCACCTCCACCGCCGCCGATTAAGGAAAGTAAGAAAAGAGCATTTAGAGGAGTAAGAACTAGGCCATGGGGAAAATTTGCCGCGGAGATAAGAGATTCAACAAGAAAAGGTGTTAGAGTGTGGATTGGAACATTCGACACGGCCGAAGCAGCTGCTTTAGCTTATGATCAAGCAGCTTTTTCAACAAGAGGTTCATTGGCAGTGTTGAATTTTCCTGAAGAAGTAGTGAGAGAATCACTTAAAGAAATGGCTAGTAATTCTAAGCCTTTGGATGAAGGCACTTCACCTGTATTGGCACTCAAAAGAAAACATAGCATGAGAAAAAAGTCCAATAAGGTAAGTACAAAGAGAATCAAAAGTGAATATCATAGTGATCAAATTCAGATTGAGACCAATATTAATTCTCAAAATTTGTTTGTTTTTGAGGATTTGGGTGCTGAATATCTGGACCAACTATTGAGCTTAACTTATTAG 723 0.3693 MDFDSLLFQNQNQNLMYFPNNFSWELEEDFVNFFSDVNNYSNSSGSLSSTESNSSGSVLSNEPLEVSSNTTYKQVIKETQTSSPPPPPPIKESKKRAFRGVRTRPWGKFAAEIRDSTRKGVRVWIGTFDTAEAAALAYDQAAFSTRGSLAVLNFPEEVVRESLKEMASNSKPLDEGTSPVLALKRKHSMRKKSNKVSTKRIKSEYHSDQIQIETNINSQNLFVFEDLGAEYLDQLLSLTY* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2894 240 MobiDBLite consensus disorder prediction 44 97 - -
Mtr7g2894 240 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 237 - -
Mtr7g2894 240 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700|GO:0006355
Mtr7g2894 240 CDD AP2 98 156 IPR001471 GO:0003700|GO:0006355
Mtr7g2894 240 Pfam AP2 domain 98 147 IPR001471 GO:0003700|GO:0006355
Mtr7g2894 240 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Mtr7g2894 240 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Mtr7g2894 240 Gene3D AP2/ERF domain 97 157 IPR036955 GO:0003700|GO:0006355
Mtr7g2894 240 SMART rav1_2 97 161 IPR001471 GO:0003700|GO:0006355
Mtr7g2894 240 MobiDBLite consensus disorder prediction 44 80 - -
Mtr7g2894 240 PANTHER DNA-BINDING DOMAIN 33 237 IPR044808 GO:0003700|GO:0009873
Mtr7g2894 240 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2894 Mtr-Chr7 45730575 45731863 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2894 67 236 AP2-EREBP Transcription Factor Family AT2G31230 50.265 1.31e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2894 AP2 2.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2894 K14516 - gmx:100779524 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2894 7 45730575 45731863 Mtr1g2399 1 34554697 34555740 PCT