Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2893 ATGGAGGGAGAAGGAAATAAAAATGCAGAAGCACGATACAGAGGAATTCGTAGGAGACCATGGGGTAAGTTTGCAGCAGAAATTCGTGACCCAACTAGAAAAGGCTCTCGTATTTGGCTTGGAACATTTGAAACAGCAGAACAAGCTGCACGTGCTTATGATGCTGCTGCTTTTCATTTTCGTGGTCACAAAGCCATTCTCAATTTCCCAAATGATTTTTCTCATTCTAGTATTAATTATATTCCAAACACTACTTCAACCTCAAATTCATATCAACAACAAGGTGATGATACTTTTGATCAATTGGAATGCTTGGACAACAAGTTATTGGAAGAACTTCTTGGTCAGGTGCAAGATGATGGTGCAGGTGGCTCTAGATTTGCTTAA 387 0.3953 MEGEGNKNAEARYRGIRRRPWGKFAAEIRDPTRKGSRIWLGTFETAEQAARAYDAAAFHFRGHKAILNFPNDFSHSSINYIPNTTSTSNSYQQQGDDTFDQLECLDNKLLEELLGQVQDDGAGGSRFA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2893 128 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Mtr7g2893 128 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Mtr7g2893 128 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 113 - -
Mtr7g2893 128 PANTHER DNA-BINDING DOMAIN 12 113 IPR044808 GO:0003700|GO:0009873
Mtr7g2893 128 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Mtr7g2893 128 CDD AP2 11 72 IPR001471 GO:0003700|GO:0006355
Mtr7g2893 128 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Mtr7g2893 128 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Mtr7g2893 128 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Mtr7g2893 128 Pfam AP2 domain 12 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2893 Mtr-Chr7 45708610 45709086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2893 8 114 AP2-EREBP Transcription Factor Family AT3G23230 52.941 1.17e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2893 AP2 7.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2893 - - gmx:100778998 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2893 7 45708610 45709086 Mtr7g2893 7 45708610 45709086 ECH
Mtr7g2893 7 45708610 45709086 Mtr1g2400 1 34567233 34568011 PCT