Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2890 ATGGAAAATGAAAGAAAGAAAAAGGTGAGTGAATGTGAATTACCAAAGCAAATTAAGTATAGAGGAGTGAGGATAAGGCCATGGGGAAAATTTGCTGCAGAGATTCGAGATTCGGCTAGGCATGGTGCTCGAGTTTGGCTTGGTACATTTAACACTGCTGAGGAAGCTGCAAGAGCTTATGATCGCGCTGCTTTTGATATGAGAGGTTCTTCTGCTATTCTCAATTTTCCTCAAGAACATTTTCCAAGCAATGTGGCTTCTAATCCCTCTTCTTCATCCAATTCAACCTCATCATCATCTTCAACGGTTAAATCGGAGCTTGGTGAACAAATTATAGAGTTTGAGTATTTGGATGAAAAATTATTAGAGGAACTCTTGGATCCTGAGAATACCATCAATAACAACTGGTTCAAGTAG 417 0.3933 MENERKKKVSECELPKQIKYRGVRIRPWGKFAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFDMRGSSAILNFPQEHFPSNVASNPSSSSNSTSSSSSTVKSELGEQIIEFEYLDEKLLEELLDPENTINNNWFK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2890 138 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Mtr7g2890 138 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Mtr7g2890 138 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mtr7g2890 138 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Mtr7g2890 138 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Mtr7g2890 138 MobiDBLite consensus disorder prediction 83 104 - -
Mtr7g2890 138 PANTHER OS09G0571700 PROTEIN 13 130 - -
Mtr7g2890 138 PANTHER DNA-BINDING DOMAIN 13 130 IPR044808 GO:0003700|GO:0009873
Mtr7g2890 138 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Mtr7g2890 138 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Mtr7g2890 138 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2890 Mtr-Chr7 45691155 45691900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2890 16 129 AP2-EREBP Transcription Factor Family AT3G23230 60.833 3.56e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2890 AP2 4.4e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2890 7 45691155 45691900 Mtr7g2890 7 45691155 45691900 ECH
Mtr1g2407 1 34661891 34662642 Mtr7g2890 7 45691155 45691900 PCT