Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2888 ATGGAAGATGAGTTAAAGGAAAAGGTGAAACAAGATGAATTACCAAAGAAAATAAAGTATAGAGGAGTAAGGATAAGGCCATGGGGAAAATGTGCAGCAGAGATTCGAGATTCGGCTAGACATGGAGCTCGAGTTTGGCTTGGTACATTTAACACTGCTGAGGAAGCTGCAAGAGCTTATGATCGTGCTGCTTTTGAAATGAGAGGTTCTTCAGCTATTCTTAACTTTCCTCATGAACATTATTTTCCTTGCAGTGTGGTATATAACCCTTCTAAGCCGTCTTCTTCCTCCAATTCAACCTCATCATCATCATCTTCAAAGGTTAAATCGGAACTTGTTGAACAAGTTATAGAGTTTGAGTATTTGGATGAAAAATTATTAGAGGAACTCTTGGATTTTGAGAGCATCATCAACCAGGACTTGTTCAAGTAG 432 0.3866 MEDELKEKVKQDELPKKIKYRGVRIRPWGKCAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFEMRGSSAILNFPHEHYFPCSVVYNPSKPSSSSNSTSSSSSSKVKSELVEQVIEFEYLDEKLLEELLDFESIINQDLFK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2888 143 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Mtr7g2888 143 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Mtr7g2888 143 PANTHER DNA-BINDING DOMAIN 13 135 IPR044808 GO:0003700|GO:0009873
Mtr7g2888 143 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Mtr7g2888 143 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Mtr7g2888 143 PANTHER OS09G0571700 PROTEIN 13 135 - -
Mtr7g2888 143 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Mtr7g2888 143 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mtr7g2888 143 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Mtr7g2888 143 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2888 Mtr-Chr7 45678252 45678981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2888 16 134 AP2-EREBP Transcription Factor Family AT3G23230 62.810 2.23e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr7g2888 AP2 8.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2888 - - mtr:MTR_7g096700 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2888 7 45678252 45678981 Mtr7g2888 7 45678252 45678981 ECH