Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2885 ATGGTTAACAACTTGCATCAACTACTTAGAAGTCTTTGTTTCAATACTCAGTGGAATTATGCAATCTTTTGGAAGCTCAAACATAGTGCTCCATTGATCTTGACATTGGAGGATGCTTACTATGACAATTCAGATTATTTTGACGCTTCAGAAAATAAGTACTGTCAGAAGACCTTAGAACAGATTGAGGGTGGGAAATTTTCACATGACGCTTTGGGGTTAGCTGTTGCAAAGATGCGGTATAATGCATATCCATTAGGGCAAGGTATTGTTGGACAGGTAGCCGTTACTGGAAAGCATCAGTGGATCTGTGCAGATAATAATCAAGTTACAAGTTCTGGCTTGTCTTTTGAGACAATTGTTGTTGTGTCTGTAGTCCCACTAGGCGTTGTTCAGCTCGGCTCTCTAATAAAAGTGAATGAAGATACGGGGGTTGTTAATCATATAAGAAATCTTTTTTTGTCTACTCAAGATTACTCAATAGATCACATTCCTAGTCAAATACAAAGTAGTTCGAAGAGTTCTTCATCTCAGCCAGATGTCTTGATGGAAAAATCATCTTCGGATTTTATGCCTGCGTGCATGAGGAATAAAACAGTGGATGTTTTGACGCCCCTTCAATGTTCTGGGAGGAACAACACAACTCATTCTGCTTATTGGGAAATGGGTGATAATATGGTCAAGCATGAAGGGGCCGAGCTCTATAGTGATGTGAGTCCCATTTTGCTTCAGTCAATGTCTGATATGATTAATGTGGAGCATCAGGAATTTGGAGAGATAAGACCTATAAACTCGAGAGAGTGTGAAGGGGGCAGTAGTGGCTGCAAAAATATGATATTGGACTCGGAACAAAATCGCTCGTCATTTTTAAACAATTCTGCTATAAATAATGCTGGCGTCTATGATTTAATACACCAATCGGAAAAGAATTCCTCCTATACACCGTTGAAGTTTCCGGCTGGATGTGAACTACTTGAAGCACTTGGACCATCTTCTTTGAAAGGGAGTAAATATTTTGATTGGTTGGCACAGGTTAATCAAGATATGAAAATTGTGGATGTGCCGGATGTGTTTAACACTAGTCAGCTGACTTCTGAATCTCATCCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATCTGTCACAGTAGTAATAATGATGTTAATAGTGAATTATCATTTTGTAGATCAATGCAATCTGCATTGAGTTCTGGAAAAACAATCGATGCTTCTATTCAAGATGTGCACACTATAGATCATACTTCTCTTGTCAGAGAGGACAAAAACCATTGTTTGAGTTCATCATCTAAAGTTGTTTCTTCTACATGTCCTAGTGCTTGTAGTGAACAATTTGAAAGATCTTCTGAACCATCTAAAAACAGCAAGAAGAGGGCTAGGCCCGGGGAAAGTTGTAGACCTCGACCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTTAGAGAGTTGGTACCAAATGGAGCTAAGTGTAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTCTTTCTGCAAAGCATAACTAAGCATGCTGACAAGCTAACTAAACTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGACATTCTTGGATCCTCTAGTTCTGAGCAGGGTTCAAGTTGGGCAGTTGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAACAATGGACAGATGCTTATTGAGACGCTATGTGAAGAGAGCAGCCATTTTCTTGAAATAGCAGAAGCTGTAAGAAGCTTGGGGCTTACAATTTTGAAGGGTGCAACAAAAGCTCGTAATAAGAAGATATCGATATGCTTTATCGTTGAGGGTGAAAACAACAGAAATGTACACAGATTGGACATCTTGTGGCCACTTGTTCAGATACTACAATCCAAGAGCGTTGTGTATCAACAGTAA 1956 0.3967 MVNNLHQLLRSLCFNTQWNYAIFWKLKHSAPLILTLEDAYYDNSDYFDASENKYCQKTLEQIEGGKFSHDALGLAVAKMRYNAYPLGQGIVGQVAVTGKHQWICADNNQVTSSGLSFETIVVVSVVPLGVVQLGSLIKVNEDTGVVNHIRNLFLSTQDYSIDHIPSQIQSSSKSSSSQPDVLMEKSSSDFMPACMRNKTVDVLTPLQCSGRNNTTHSAYWEMGDNMVKHEGAELYSDVSPILLQSMSDMINVEHQEFGEIRPINSRECEGGSSGCKNMILDSEQNRSSFLNNSAINNAGVYDLIHQSEKNSSYTPLKFPAGCELLEALGPSSLKGSKYFDWLAQVNQDMKIVDVPDVFNTSQLTSESHPEHLLEAMVANICHSSNNDVNSELSFCRSMQSALSSGKTIDASIQDVHTIDHTSLVREDKNHCLSSSSKVVSSTCPSACSEQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQSITKHADKLTKLADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSNNGQMLIETLCEESSHFLEIAEAVRSLGLTILKGATKARNKKISICFIVEGENNRNVHRLDILWPLVQILQSKSVVYQQ* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2885 651 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 153 IPR025610 -
Mtr7g2885 651 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 465 514 IPR011598 GO:0046983
Mtr7g2885 651 MobiDBLite consensus disorder prediction 449 478 - -
Mtr7g2885 651 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 315 IPR043561 GO:0003700|GO:0006355
Mtr7g2885 651 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 313 651 IPR043561 GO:0003700|GO:0006355
Mtr7g2885 651 MobiDBLite consensus disorder prediction 455 478 - -
Mtr7g2885 651 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 313 651 - -
Mtr7g2885 651 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2885 Mtr-Chr7 45639013 45645449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2885 6 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 35.874 1.26e-119 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2885 - - mtr:MTR_7g096650 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2885 7 45639013 45645449 Mtr7g2885 7 45639013 45645449 ECH
Mtr7g2885 7 45639013 45645449 Mtr1g2421 1 34776018 34781947 PCT