Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2883 ATGATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGGAGAAAATGTGTTAGAGGTTGTATTTTTGCACCTTACTTTTGCCATGAACAAGGTGCTACCCATTTTGCAGCTATTCATAAGGTCTTTGGTGCAAGTAATGTTTCAAAGCTTCTTGCACACCTCCCTGTGACCGATCGTTGTGAAGCTGCAGTCACAATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGATGTGTTGCCCATATTTTTGCACTCCAGCAACAGGTGGTCAATTTACAAGCACAGCTAGCTTTTCTGAGAGAGCAAGCAGCTCAAAGGTGTCTCAATGCCCCAAATTCTGAAAACCCTAATGAGAAGAACTTTGGAAAACCTACTAATATTCTCCCTCAAGATCTTCAAAGTTGGTTCCAGATGGAAAATTCCAACATGTGTTCTCAATTTCTTCCCGATTTCTCTTCTTCTACTGATGATCTCTCATCAACAACACAATATTATAATGGGACTACCACTACTCTCATGGATCTAAACCCTATCGGAAACTATGAAAATTCAGGAACCATATTGAAAGAAAGCATCCCATCATTTTCTAACTTTGATGAGCGATGTAATAATTCAATGTCCTTTGACAACATGCAAAGACAGTGGACCTATCAGTAA 675 0.3985 MMTGSGSPCGACKFLRRKCVRGCIFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAFLREQAAQRCLNAPNSENPNEKNFGKPTNILPQDLQSWFQMENSNMCSQFLPDFSSSTDDLSSTTQYYNGTTTTLMDLNPIGNYENSGTILKESIPSFSNFDERCNNSMSFDNMQRQWTYQ* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2883 224 PANTHER LOB DOMAIN CONTAINING PROTEIN 2 221 - -
Mtr7g2883 224 Coils Coil 88 108 - -
Mtr7g2883 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 2 221 - -
Mtr7g2883 224 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Mtr7g2883 224 ProSiteProfiles LOB domain profile. 7 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2883 Mtr-Chr7 45620357 45621799 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2883 8 123 AS2 family AT3G58190 80.508 5.21e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr7g2883 LOB 9.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2883 K13945 K13944 gmx:100816960 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2883 7 45620357 45621799 Mtr7g2883 7 45620357 45621799 ECH
Mtr7g2883 7 45620357 45621799 Mtr1g2425 1 34818915 34820361 PCT