Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2875 ATGGCTGGTGAGTGGTTTTGTAAGAATGAAGAAGACAAGGCTATGTTGGAATCTGTATTGGGTAATGAAGCTTTTGCATTTTTTAGCTCAGCAGTTAGTAAACATGTATTTTCGGATGTTATTGTTCCGCCGAATCTTGACGTGACTATCCACCAAAGGTTGTGTCACATTGTTAAGGGTTCCAAGTGGAACTACGCGATTTTGTGGCAGGTTGCCGGTTTGAAATCCGGTGGCTATGTGTTGAAATATGGTGAGGGACACTGTCAGGATCCCAAAGGGGGTCCAAGGAATGAGCAGGAAAGGGAGAAAGATGATGTTAGGAGGAAGGTTTTGGGGAGGATTCATGGTTGCTGGGGTGGATCTAGCTCAGTTGAGAATATTTATAAGAAATTGGACAGTGTTTCGGATTTGTATATGCTTTACTTGACCTCTGTCTATTATGTGTTTGGTTTTAATTCTCAGTATGGTCCTGGAAATTCTTTTAAGTGTGCTAAACCAAGTTGGTCTTCTGATGCTGGTAGTTGTTTAAATCAGTATGAATCGAGGTCGTTTCTGGCTAAATCGGCTGGTTTTCAAAGTGTTGCTTTTGTACCTCTTAAAGCCGGGGTTATAGAGCTTGGTTCGACGGAGATGGTGCCTGAAGAGCAAGGTTTTTTGGATATGGTTAAGGCAACTTTTGGAGAATCTATCTCTGGACAGGCTAAGGTTGCTCCGAAGATTTTTGGGCACGAGTTAAGCTTGGGGGATACAAAATCTCAGTCCATAACTATTAGTTTCTCCCCGAAAGTGGAAGATGATTCTGGTTTCACTTCCGACTCTTACGAAGTACAAGCGCTTGGAGCAAACCATGCTTATGGTAATTCTTCCAATGGGGGTGTAGGAGACAGTAACGAGGCAAAAAAGTACCCTCAGTTAGGTCAAATGATTCCTGGGAATTTTACTTCTCAAGCAAGAGTTTCTTCTATTGATTTGGGTAATGAAGACTCCTCCTCGCCTCTTGGAGAAGAGCGGAAGCCTAGAAAAAGAGGGAGAAAGCCTGCCAACGGACGAGAGGAACCACTGAATCATGTTGAAGCGGAGAGGCAAAGACGGGAGAAGCTTAACCAGAGATTTTACGCCTTAAGAGCTGTTGTTCCTAACATTTCTAAAATGGACAAGGCTTCTCTTCTTGGCGATGCTATTACCCATATCACTGATCTCCAGAAGAAGATCAAGCTTATGGAAACCGAAAAAAACATGGCTGACAATAAGGGCCAGCAATTGCCATTGCAAGATATTGATTTTCAGGCTCGACAGGATGATGCAGTTGTTAGAGTTAGCTGCCCCATGGATATCCACCCGGTTTCTGGAATTGTTAAAGTGTTCAGAGAGCATCAAATTGTAGCTCAAGAGGCCAATGTTTCAACTTCCCAGGATAAAGTAATTCATACATTCTCTATCAGAACTCAAGGAGGGGAAGCATCTGCTATACAGTTGAAAGAAAAGCTTGAAGCATCTTTAGCCAAAAATTAA 1512 0.4266 MAGEWFCKNEEDKAMLESVLGNEAFAFFSSAVSKHVFSDVIVPPNLDVTIHQRLCHIVKGSKWNYAILWQVAGLKSGGYVLKYGEGHCQDPKGGPRNEQEREKDDVRRKVLGRIHGCWGGSSSVENIYKKLDSVSDLYMLYLTSVYYVFGFNSQYGPGNSFKCAKPSWSSDAGSCLNQYESRSFLAKSAGFQSVAFVPLKAGVIELGSTEMVPEEQGFLDMVKATFGESISGQAKVAPKIFGHELSLGDTKSQSITISFSPKVEDDSGFTSDSYEVQALGANHAYGNSSNGGVGDSNEAKKYPQLGQMIPGNFTSQARVSSIDLGNEDSSSPLGEERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITHITDLQKKIKLMETEKNMADNKGQQLPLQDIDFQARQDDAVVRVSCPMDIHPVSGIVKVFREHQIVAQEANVSTSQDKVIHTFSIRTQGGEASAIQLKEKLEASLAKN* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2875 503 Pfam Helix-loop-helix DNA-binding domain 355 401 IPR011598 GO:0046983
Mtr7g2875 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 400 IPR011598 GO:0046983
Mtr7g2875 503 CDD ACT_UUR-ACR-like 451 500 - -
Mtr7g2875 503 Gene3D - 344 416 IPR036638 GO:0046983
Mtr7g2875 503 MobiDBLite consensus disorder prediction 323 362 - -
Mtr7g2875 503 CDD bHLH_AtAIB_like 348 411 - -
Mtr7g2875 503 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 226 IPR025610 -
Mtr7g2875 503 Coils Coil 397 417 - -
Mtr7g2875 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 422 IPR036638 GO:0046983
Mtr7g2875 503 PANTHER TRANSCRIPTION FACTOR BHLH3 3 502 - -
Mtr7g2875 503 MobiDBLite consensus disorder prediction 330 362 - -
Mtr7g2875 503 PANTHER MYC 3 502 IPR045084 GO:0003700|GO:0006355
Mtr7g2875 503 SMART finulus 357 406 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2875 Mtr-Chr7 45527627 45529928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2875 3 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 47.431 3.70e-159 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g2875 bHLH-MYC_N 2.2e-35 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2875 - - gmx:100819968 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2875 7 45527627 45529928 Mtr7g2875 7 45527627 45529928 ECH