Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2869 ATGACTTCCTCTGTTGAAGAACCCACCGTCTCCGCCGTCGAGCAAACCATTGTGGAGGAGCCGGCCGCCGTCGACCCTCTCCCACCTGTTGTCAATGAATCTGACGAGCCCACTGCCGCCAAGCCAAAGAAAGCCCCCAAAGAGCCAAAACCCAGAAAGCCCGCTTCCAAGAACACTCGCACTCACCCTACCTATGAAGAGATGGTGACGGACGCGATTGTGACTCTTAAGGAGAAAAACGGTTCGAGCCAGTATGCTTTGGCCAAGTTCATCGAAGAGAAGCATAAGAATCTTCCAGCGAACTTCAAGAAGATTCTTCTGGTTCAGATCAAGAAGCTTGTTGCTTCTGGGAAGCTTGTTAAGGTCAAGGGATCGTACAAGTTACCAGCTAAGTCTGCTGCTCCAGCTAAGAAGCCAGCTGCCGCAAAGCCCAAGCCCAAGCCCAAGGCGAAAGCACCTGTAGCCAAGGCTCCAGCTGCTAAGTCTAAGGCGAAAGCTGCTCCTGCTAAGGCTAAGGCTAAGGCTAAGGCCAAAGCTGCTCCTGCCAAGGCTAAGCCAGCTGCCAAGGCTAAGCCTGCTGCGAAGGCAAAGCCTGCTGCCAAGGCTAAGCCTGTGGCGAAGGCGAAGCCCAAGGCGAAGGCTCCTGTTGCTAAGGCCAATGCTGTACCTGTGGCTGCTAAGGCAAAGCCCGCGGCTAAGGCTAAGCCAGCTGCCAAGGCGAAACCAGCTGCGAGGCCTGCTAAGGCTTCAAGAACTTCAACAAGGACATCACCTGGGAAGAGAGCTGCTGCGGCAAAACCGGCTGTGAAGAAAGCTGCTACGCCAGTGAAGAAGGCTGTACCGGCGAAAAAGGCTGCTACGCCAGTGAAGAAGGCTGCACCAGCAAGGAAGGCTCCAGCAAAAGGGGGGGTAGGAAGTGAAAAGGGGGAGGGGTAA 936 0.5513 MTSSVEEPTVSAVEQTIVEEPAAVDPLPPVVNESDEPTAAKPKKAPKEPKPRKPASKNTRTHPTYEEMVTDAIVTLKEKNGSSQYALAKFIEEKHKNLPANFKKILLVQIKKLVASGKLVKVKGSYKLPAKSAAPAKKPAAAKPKPKPKAKAPVAKAPAAKSKAKAAPAKAKAKAKAKAAPAKAKPAAKAKPAAKAKPAAKAKPVAKAKPKAKAPVAKANAVPVAAKAKPAAKAKPAAKAKPAARPAKASRTSTRTSPGKRAAAAKPAVKKAATPVKKAVPAKKAATPVKKAAPARKAPAKGGVGSEKGEG* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2869 311 MobiDBLite consensus disorder prediction 37 55 - -
Mtr7g2869 311 Pfam linker histone H1 and H5 family 62 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mtr7g2869 311 Gene3D - 56 150 IPR036388 -
Mtr7g2869 311 SMART h15plus2 59 125 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mtr7g2869 311 CDD H15 59 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mtr7g2869 311 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 61 130 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mtr7g2869 311 SUPERFAMILY "Winged helix" DNA-binding domain 58 141 IPR036390 -
Mtr7g2869 311 PANTHER HISTONE H5-RELATED 4 298 - -
Mtr7g2869 311 MobiDBLite consensus disorder prediction 126 311 - -
Mtr7g2869 311 PANTHER HISTONE H1 4 298 - -
Mtr7g2869 311 PRINTS Histone H5 signature 48 69 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mtr7g2869 311 PRINTS Histone H5 signature 75 92 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mtr7g2869 311 PRINTS Histone H5 signature 157 171 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mtr7g2869 311 PRINTS Histone H5 signature 194 211 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mtr7g2869 311 PRINTS Histone H5 signature 216 235 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mtr7g2869 311 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2869 Mtr-Chr7 45487687 45488994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2869 56 129 Single Myb Histone (SMH) Gene Family AT1G72740 35.135 3.01e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2869 K11275 - gmx:100795994 132.88