Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2866 ATGTCGAATGATGTTGTGAAAGTGAAGAGAGAAACGATTGCAGCATGCATGACCTGTCCACTATGTAACAATTTGTTCAAACAACCTACAACTATATCTGAATGTCTTCACACGTTTTGCAGGAAATGCATTTATGACAAATTTACTGATGAGGATTTGGAATGCTGTCCAGTATGCAACATTGATTTGGGTTGTGTTCCACTTGAGAAACTAAGGCCTGACCACACTAAGCAAGATGTAAGGGCCAAAATCTTCCCCTTAAAGGGAAGAAAGGTGAAAGCACCTGAACCTGAAGCTGTCGCCGCCTCAGAACCATTGCCAGCTAAAAGAAAGGAGAGATCTCTTTCGTCTTTGGTGGTCAACACACCAAGGGTATCTGTGCAAACAACCATGACAGGAAGAAGAACGAAACCTACCAGAAAGGCTAGCAGTCTGCGGTCCTCTAGTTTTTCCATTGATAAATCAATTAAAAAAGAGGCAGAACTACTGGATGACTGTCCCGAGAGTTCAAGCTCACCTGAAGCTTCAAATAAGTTGCGTCAGAACAACGGACAGCAGAGTGAGGGTAGTCAATCCGCACCAAATAGAGTAACAGAGAACGATTCCAAAACATGTGACGCAAAGATGGATCTTTGGAAACCGTTGAATTGTTTAGTAGAGGTCGCAAGCAGGACTAAATCTTTGAAGTCTAATAATATACAAGGGTCTGATGCTAAACCAGAACCTGCTCAAGCAAATGAGAGTGGCTCTCAAGTGCAGAAAATCAAAAATAAGGAAAAGAAACGCAAGGCAAAAGTTGAGGATGAAAGTATTAGCCCATTTCCCGTTTCTTCAGATACAGCAAAACCCAATAAATTGCGCAGAGTACGCAGGAAAAAGGAACCTTTTGGAGAATCAGGCATATCACCCCAAGCTGTGGTTGATTCTACCGGCAGTAAACTCTTTAAGGGTGGTCCAATTTGGTTCTCCTTAGTAGCTTCTGAAAATCAAGAAGGAGACACACCCTTGCCACAAATTCCTGCAAGCTATGTGAGAATAAAGGATGGAAGCGTACCTGTCTCATTTATCCAAAAATACCTAATGAAGAAACTCGATCTGACCAATGAAACTGAGATTGAGATTATATGTATGGGACAACCAGTTCTCCCTACATTGACACTACATAATTTGGTTGAGCTGTGGCTTGATTCAACAGCGTCCACATCACACCGAATTCCGGCTATTATTGGATCCTCAGCAAAGGATTTTGTCATGGTCCTTGCTTATGCCCGGAAATCTCCACGCCCTTGA 1290 0.4248 MSNDVVKVKRETIAACMTCPLCNNLFKQPTTISECLHTFCRKCIYDKFTDEDLECCPVCNIDLGCVPLEKLRPDHTKQDVRAKIFPLKGRKVKAPEPEAVAASEPLPAKRKERSLSSLVVNTPRVSVQTTMTGRRTKPTRKASSLRSSSFSIDKSIKKEAELLDDCPESSSSPEASNKLRQNNGQQSEGSQSAPNRVTENDSKTCDAKMDLWKPLNCLVEVASRTKSLKSNNIQGSDAKPEPAQANESGSQVQKIKNKEKKRKAKVEDESISPFPVSSDTAKPNKLRRVRRKKEPFGESGISPQAVVDSTGSKLFKGGPIWFSLVASENQEGDTPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTNETEIEIICMGQPVLPTLTLHNLVELWLDSTASTSHRIPAIIGSSAKDFVMVLAYARKSPRP* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2866 429 MobiDBLite consensus disorder prediction 115 150 - -
Mtr7g2866 429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 115 IPR013083 -
Mtr7g2866 429 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Mtr7g2866 429 Gene3D - 304 398 - -
Mtr7g2866 429 MobiDBLite consensus disorder prediction 230 303 - -
Mtr7g2866 429 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Mtr7g2866 429 MobiDBLite consensus disorder prediction 162 202 - -
Mtr7g2866 429 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 3 425 IPR044807 GO:0004842
Mtr7g2866 429 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Mtr7g2866 429 SUPERFAMILY RING/U-box 14 78 - -
Mtr7g2866 429 SMART ring_2 19 59 IPR001841 -
Mtr7g2866 429 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 3 425 - -
Mtr7g2866 429 MobiDBLite consensus disorder prediction 169 200 - -
Mtr7g2866 429 MobiDBLite consensus disorder prediction 94 150 - -
Mtr7g2866 429 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2866 Mtr-Chr7 45452101 45457481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2866 1 347 C3H Transcription Factor Family AT2G30580 50.852 8.11e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2866 K16277 - gmx:100815540 618.231