Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2857 ATGGAAGTTGTTGGTATGAAGAAGGAGAATATGGGATTTGAGGAAACTGAGTTGAGACTTGGAATTGGATTTCTTGGAAATAATGGATCAGCCACAGCTACTGAAGGAGTTGTAAGGAAGAGAGGATTTTCTGAGACTGAAACTGATGATGATACAACTACTATGGATTTGATGCTTAATCTTTCCTCTAAGGAAGCTACTGCTGAGGTAGATCCAAGTGATATAACCACCAAGACTTTGCAAAAGGAGAAGACCCTTTTGCCTGCAGATCCTGCCAAGCCTCCTGCAAAGGCTCAAGTGGTGGGTTGGCCACCTGTCCGGTCGTACCGGAAGAACATGTTAGCAATGCAAAAGAGTGAAAGTGAGAAGAACAGCAGTTCCAATTTCAATGCAATTACATTTGTGAAAGTTAGTATGGATGGAGCTCCTTACCTTCGTAAGGTTGACTTGAAGATGTACACAAGTTACTCACAGCTTTCTGATTCCTTAGGCAAAATGTTCAGCTCCTTCACCATTGGCAACTGTGAATCTCAAGGAATGAAGGATTTCATGAATGAGAGTAAGTTGATGGATCTTTTAAACAATTCTGATTATGTTCCAACCTATGAAGACAAGGATGGTGACTGGATGCTTGTCGGTGACGTCCCATGGGAGATGTTTGTTGAATCATGCAAACGTTTGCGTATCATGAAAGGAAAGGAGGCTATTGGTATAGCACCAAGAGCTATGGAAAAATGCAAGAACAGGAGCTAG 753 0.4197 MEVVGMKKENMGFEETELRLGIGFLGNNGSATATEGVVRKRGFSETETDDDTTTMDLMLNLSSKEATAEVDPSDITTKTLQKEKTLLPADPAKPPAKAQVVGWPPVRSYRKNMLAMQKSESEKNSSSNFNAITFVKVSMDGAPYLRKVDLKMYTSYSQLSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGIAPRAMEKCKNRS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2857 250 Gene3D - 126 243 - -
Mtr7g2857 250 PANTHER AUXIN-INDUCED PROTEIN AUX28 8 243 - -
Mtr7g2857 250 Pfam AUX/IAA family 15 241 IPR033389 -
Mtr7g2857 250 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 243 IPR003311 GO:0005634|GO:0006355
Mtr7g2857 250 ProSiteProfiles PB1 domain profile. 132 232 IPR000270 GO:0005515
Mtr7g2857 250 SUPERFAMILY CAD & PB1 domains 123 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2857 Mtr-Chr7 45394981 45400876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2857 136 235 B3 DNA Binding Superfamily AT3G61830 33.000 1.44e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mtr7g2857 AUX_IAA 6.4e-83 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2857 K14484 - gmx:100810013 345.125