Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2856 ATGGGGAGCTATATTGAAACAGAGTTGATTATTAATCACAAGGACACAGAATTAAGGTTGGGATTGCCTGGAAGTGATGATGAACAATCATGCAATGGTGGTTCTATTGTTAGAAGCAACAAGAGATCTTTTTCACCTGAAACAAGTGTTGAAGAAGAGTCCATTTCTAAGAGCTCTGGTGATTCTAATTCCACAACCACAAGTGATCGTGATCATGACCAAGACTCTGTCCAACCTACAAAGGTACAAGTTGTTGGGTGGCCACCAATTAGATCTTTTAGGAAGAATAGTTTACAACAAAATAAAGTGGAAGATGGAAATGGAATGTATGTGAAAGTGAGCATGGCTGGTGCACCTTACTTGAGGAAAATAGATCTCAAAGTTTACAAGAGTTACTCAGAACTTCTTAAGGTTTTGGAAAATATGTTCAAGTGTACATTTGGTGAATATTCAGAAAGAGAAGGGTACAATGGATCTGAATATGCTCCTACTTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGAGATGTCCCATGGAACATGTTTATATCCTCATGCAAGAGGCTCAAGATAGTGAAAGGATCAGAAGCAAAAGGGTTGGCATGTTTATGA 615 0.3854 MGSYIETELIINHKDTELRLGLPGSDDEQSCNGGSIVRSNKRSFSPETSVEEESISKSSGDSNSTTTSDRDHDQDSVQPTKVQVVGWPPIRSFRKNSLQQNKVEDGNGMYVKVSMAGAPYLRKIDLKVYKSYSELLKVLENMFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLKIVKGSEAKGLACL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2856 204 SUPERFAMILY CAD & PB1 domains 103 192 - -
Mtr7g2856 204 Gene3D - 102 204 - -
Mtr7g2856 204 MobiDBLite consensus disorder prediction 28 65 - -
Mtr7g2856 204 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 202 IPR003311 GO:0005634|GO:0006355
Mtr7g2856 204 PANTHER AUXIN-INDUCED PROTEIN 10 202 - -
Mtr7g2856 204 ProSiteProfiles PB1 domain profile. 108 200 IPR000270 GO:0005515
Mtr7g2856 204 MobiDBLite consensus disorder prediction 21 81 - -
Mtr7g2856 204 Pfam AUX/IAA family 16 202 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2856 Mtr-Chr7 45384732 45386116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2856 96 201 B3 DNA Binding Superfamily AT2G46530 37.736 3.01e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mtr7g2856 AUX_IAA 2.9e-57 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2856 K14484 - gmx:100792134 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2856 7 45384732 45386116 Mtr7g2856 7 45384732 45386116 ECH