Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2853 ATGGAATCACACGGCGGAGGACCACTCCGTTCCCGGAGTTCCCAATCCGCTTCTCCATCCCACTCCGCCTCCGCTTCCGCCACCTCATCCATCCACAAACGCAAACTCGTCTCCGAAGATCACGCGCCACCGTTCGCGCCTTCTTCCTTATCCGCCGACACACGCGACGGCGCCTTAACATCCAATGACGACCTCGAAAGCATCTCCGCTCGCGGCAACGACTCTGATTCCGACGACGACTCCGAAGACGCAGTTGTCGACGACGACGAAGACGAGTACGATAATGACAACGGTTCCTCCATGCGGAATTTCACTGCTGCTAGGCTTAACAATGCTCCTTCCGCTCCTCGCAATACGAAGATCAAAACTGAAAATTCAACGGTTAAGATTGAACAATCTGATGGAGCTAAAGATGCTGGACCTCCTGTCACCGGTGCCGGTGCCGGCGGTGGTTCTGTTCCCGGCATTGTGGTTAAGGAGGACGCGACGAAGATATTCACTGAAAATTTGCAGACTAGTGGTGCTTATAGTGCCAGGGAAGAGAGTCTCAAGAAAGAGGAAGAAACTGGAAAGCTCAAATTTACATGTCTGTCAAATGATGGAGTTGACCAGCATATGGTTTGGTTGATAGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTACATTGTCCGGCTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGTAATCACGTTGTTGGAGGCATTACATATCGTCCATATGCAAGCCAGAGGTTTGGTGAGATAGCCTTTTGTGCAATTACGGCTGATGAGCAAGTAAAAGGGTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCTCGTGATGTAGATGGGCTGACACATTTTCTCACATATGCTGACAATAATGCTGTTGGATATTTCATCAAACAGGGATTTACTAAAGAGATTCACTTGGAGAAAGATCGATGGCATGGTTACATAAAGGATTATGATGGGGGAATTCTCATGGAATGTAAGATTGATCCAAAGCTTCCCTACACTGATTTATCAACTATGATCCGTCGTCAAAGACAGGCAATAGATGAAAAGATTAGAGAATTGTCTAATTGTCAAGTTGTTCATGAAGGACTCAATTTTTATAAGAATGAAGCTGGTATTCCTATGAAAATTATTAAAGACATCCCTGGTTTAGGTGGAGATGTTGGATGGAGTCCTGATCAGTGGGGTCATTCGCGGTTCAGAACCTTAGGTGGTTCTACCGACATTGCTACAAATCTAAAACATTTAACTGCGTTTATGCGTACACTTCTGAAGACGATGCATGATCACGCTGATGCTTGGCCATTCAAGGAACCTGTTGATGAACTAGATGTTCCTGATTATTATCAAATCATCAAAGATCCAATAGATCTGAAGACAATGAGTAAAAGGGTGGAGTCAGAGCTATATTATGTCACATTTGAGATGTTTGTTGAGGATGTCAAAAGAATGTTTTCGAATGCACGGACCTATAATTCTCCAGAAACAATATATTACAAATGTGCTACAAGGCTAGAAGCACACTTTCAAAGCAAAGTGCATTCGATTCTCCAGTCCGGCAACAAAGTTCAGTAG 1629 0.442 MESHGGGPLRSRSSQSASPSHSASASATSSIHKRKLVSEDHAPPFAPSSLSADTRDGALTSNDDLESISARGNDSDSDDDSEDAVVDDDEDEYDNDNGSSMRNFTAARLNNAPSAPRNTKIKTENSTVKIEQSDGAKDAGPPVTGAGAGGGSVPGIVVKEDATKIFTENLQTSGAYSAREESLKKEEETGKLKFTCLSNDGVDQHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQRFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWHGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCQVVHEGLNFYKNEAGIPMKIIKDIPGLGGDVGWSPDQWGHSRFRTLGGSTDIATNLKHLTAFMRTLLKTMHDHADAWPFKEPVDELDVPDYYQIIKDPIDLKTMSKRVESELYYVTFEMFVEDVKRMFSNARTYNSPETIYYKCATRLEAHFQSKVHSILQSGNKVQ* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2853 542 PANTHER BNAC04G26160D PROTEIN 3 542 - -
Mtr7g2853 542 SUPERFAMILY Bromodomain 419 536 IPR036427 GO:0005515
Mtr7g2853 542 ProSitePatterns Bromodomain signature. 451 509 IPR018359 -
Mtr7g2853 542 PRINTS Bromodomain signature 449 462 IPR001487 GO:0005515
Mtr7g2853 542 PRINTS Bromodomain signature 463 479 IPR001487 GO:0005515
Mtr7g2853 542 PRINTS Bromodomain signature 479 497 IPR001487 GO:0005515
Mtr7g2853 542 PRINTS Bromodomain signature 498 517 IPR001487 GO:0005515
Mtr7g2853 542 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 200 351 IPR016181 -
Mtr7g2853 542 MobiDBLite consensus disorder prediction 53 68 - -
Mtr7g2853 542 MobiDBLite consensus disorder prediction 8 32 - -
Mtr7g2853 542 Gene3D - 188 352 - -
Mtr7g2853 542 SMART bromo_6 427 536 IPR001487 GO:0005515
Mtr7g2853 542 Pfam Bromodomain 438 521 IPR001487 GO:0005515
Mtr7g2853 542 MobiDBLite consensus disorder prediction 76 95 - -
Mtr7g2853 542 MobiDBLite consensus disorder prediction 1 152 - -
Mtr7g2853 542 CDD NAT_SF 239 293 - -
Mtr7g2853 542 ProSiteProfiles Bromodomain profile. 446 517 IPR001487 GO:0005515
Mtr7g2853 542 PANTHER GH11602P 3 542 IPR037800 GO:0004402
Mtr7g2853 542 Pfam Acetyltransferase (GNAT) family 239 317 IPR000182 GO:0016407
Mtr7g2853 542 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 192 346 IPR000182 GO:0016407
Mtr7g2853 542 CDD Bromo_gcn5_like 434 531 - -
Mtr7g2853 542 MobiDBLite consensus disorder prediction 98 132 - -
Mtr7g2853 542 Gene3D - 424 541 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2853 Mtr-Chr7 45355069 45364968 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr7g2853 Bromodomain 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2853 K06062 - gmx:100813942 882.093