Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2847 ATGAGTCTGGATAAGAATCCTTGTGTATTTTTTGATGTATCAGTTGATGGGGATCCTGTTGAAAGAATTGTTATTGAGCTTTTTTCTAGCGTAGTTCCTAAGACGGCCGAGAATTTTCGAGCTCTTTGTACAGGTGAAAAGGGGATTGGCGAAGCAACTGGGAAACCCTTGCATTATAAAGGAACATCTTTTCATCGTATAATTAAAGGATTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACCGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTAAAACATGATGGACCTGGTGTCCTTTCTATGGCTAATAGCGGGCCTAACACCAATGGATCTCAGTTTTTTATTATATTCAAGCGCCAGGCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTACCAAGGGAATAGAGATTCTGAAGAAAATGGAGCAGTTGGGAACGGCGGATGGGAAACCTACCCAGCCAATTAAAATTGTTGATTGTGGTGAAGTCTCTAAAGCAAAAAGCCAGTATGCAGTTGAGAAGGAGAAAGAGAAAAGGAAAAAGTCAATAAAATCCTTAACTTCTGATGATAGTTCTGATGCTGACAAAAAATTAAGTAGAAAACGAAAAACATCTTCCAAAGACAGGAGGAAGAGAAGGAGGAAATACTCATCATCTGATAGTGATAGTGACAGTGATAGTTATTCCTCGGATTCTGAATCAGATTCATCGTACTCTGATTCAAGTTCTTCCAGTTATGAGAAGCACAAGAAGAGGAAGAGAAGTAAACGCAGGCATGGGAAGAAGAAAAGTATTGGACGGAAGCAGAGAAGCAAGCACAGTCGTAGAAGATCAAGACACAAGTCCAAAAGGAGTTCTGAAGGTTCAAGTGATACAGAAAGCGACAGTTCTAGTGCCAGTGATAAGAAATCTGGTCATAAGAAACAAGCTGACGACAAAGCTGAAAAAGTTCTAGACATAGGAGATAAGTCTTCTATTCTTCCTGTACAAAGTCCAACCAGTCCAGAACTAGAGGTGGATCCCAAGGTTAAAACGACAGTAGATAAGCAATCACATGAAGAAGGTGAGTTGTCTCCAGAAAATGGTGAATTTCTGAATAATGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAATCAACGAGCTTATTCAGATGATTCAAATCACAACAGAGATGCGAGTCCTGGAAGAGGTCCTGCTAGGAGTCCTACCAAGAATTCTGGGGAGCTTAACCAAGGACGTGCTCTATTGGCTAGTCCTGACCATAAAGCATCTGAACCTGCTGCCTCCAAACATGGCCGGGGCATTTCAAAAAGCCCTTCGCCAAATGGTATGCCAAAGCGCGTTAAAAAAGGTCGAGGCTTTACTGAGCGTTTTGCCTTTGCACGCAGATATCGCACTCCATCTCCAGAGCGGTCTCCTCGTGCATATCGTTATGGGGATAGAAATGTTAGAAGGAACTTTGATAGAAATACAAGCTACAGAAATTATTCTGAGCGCTCACCACCGCGACGTTTTCGAAGCCCACCAAAGGGCAGCCGTCCCAGATACCAAAGCAGAAGAAGTCGTAGTAGGAGCATCTCCCGCAGTCCAGTACGAGGCCGTTATAGAGACAATGGTCGTGGCCGAAGTCCAATACGCAGTGTTAGCCCAGAAGGCAGGCGACCTCCCATAAGTGACAGATTAAAATCCCGACTTGGTGCACGAGACAGTCAACAATCTCCAAACAGAAAGAGGTCAAAGTCAAACTCAAGGAGCAATGGCTCTTCTCGTTCCAGATCCCCTGACGCTACACCCCCAAAGCGTTATAATAAAAGGACCTCTGTATCTCGTAGCAGGTCTAGATCGAGCTCTGCATCCGGGCAAAAAGGTTTGGTTTCCTATGGAGATGGTAGTCCAGGTTCTGGGTCTAGGTAG 1956 0.4346 MSLDKNPCVFFDVSVDGDPVERIVIELFSSVVPKTAENFRALCTGEKGIGEATGKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKRQAHLDGKHVVFGKVTKGIEILKKMEQLGTADGKPTQPIKIVDCGEVSKAKSQYAVEKEKEKRKKSIKSLTSDDSSDADKKLSRKRKTSSKDRRKRRRKYSSSDSDSDSDSYSSDSESDSSYSDSSSSSYEKHKKRKRSKRRHGKKKSIGRKQRSKHSRRRSRHKSKRSSEGSSDTESDSSSASDKKSGHKKQADDKAEKVLDIGDKSSILPVQSPTSPELEVDPKVKTTVDKQSHEEGELSPENGEFLNNGHDTQAEFSKPANQRAYSDDSNHNRDASPGRGPARSPTKNSGELNQGRALLASPDHKASEPAASKHGRGISKSPSPNGMPKRVKKGRGFTERFAFARRYRTPSPERSPRAYRYGDRNVRRNFDRNTSYRNYSERSPPRRFRSPPKGSRPRYQSRRSRSRSISRSPVRGRYRDNGRGRSPIRSVSPEGRRPPISDRLKSRLGARDSQQSPNRKRSKSNSRSNGSSRSRSPDATPPKRYNKRTSVSRSRSRSSSASGQKGLVSYGDGSPGSGSR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2847 651 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Mtr7g2847 651 MobiDBLite consensus disorder prediction 260 295 - -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 234 255 - -
Mtr7g2847 651 CDD cyclophilin_ABH_like 7 173 - -
Mtr7g2847 651 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 398 - -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 353 371 - -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 520 543 - -
Mtr7g2847 651 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 398 - -
Mtr7g2847 651 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Mtr7g2847 651 MobiDBLite consensus disorder prediction 376 397 - -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 296 332 - -
Mtr7g2847 651 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Mtr7g2847 651 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Mtr7g2847 651 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Mtr7g2847 651 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Mtr7g2847 651 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Mtr7g2847 651 MobiDBLite consensus disorder prediction 181 213 - -
Mtr7g2847 651 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Mtr7g2847 651 Gene3D - 1 182 IPR029000 -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 567 589 - -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 181 651 - -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 463 506 - -
Mtr7g2847 651 MobiDBLite consensus disorder prediction 590 638 - -
Mtr7g2847 651 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2847 Mtr-Chr7 45231150 45237250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2847 25 171 U-box Gene Family AT5G67530 48.322 1.80e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2847 K09566 - gmx:100791082 730.324