Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2843 ATGAACTATTTGTACCCGGTGAAAGAAGAGTATTTGGAAATTGAAGCAACCCCGTCATCATTGACATATGAAAGAGGAAGTGATGAGGGATCAACGGTTGTTATTCCACGGCCAATGGAGGGGCTTCATGAAGTAGGACCACCACCATTTCTTACAAAGACATTTGATGTTGTGGAGGACCCCACAACAAGTCACATAGTTTCATGGAGCAGAGGTGGTGCTAGCTTTGTTGTTTGGGATCCAAATGCTTTCTCCAGAGACCTTCTTCCTAGATACTTCAAACACAACAATTTCTCAAGTTTTGTTAGACAACTCAACACCTATGGTTTTAGAAAAATTGATCCTGATAAATGGGAGTTTGCAAATGAAGGATTTCTAAGAGGACATAAACATCTTTTAGCAAACATTAAGAGAAGGAGACAAACATCACAACCTAGTACTTCCCAACAACAATCATCACATTCACAAGGTCATTGTGTTGAAGTTGGTCGTTTTGGATTAGACGAAGAAATCGATCATTTGAGGCGCGACAAACAAGTGTTAATGATGGAACTTGTGAAGCTTAGACAACAGCAACATAATACAAGATCCATTCTTCAAGCAATGGAGGAAAGGCTACGTGGAACTGAAATTAAGCAGCAACAAATGATGGCTTTTTTGGCCAGAGCTATGAAAAATCCAGCTTTTATTCAGCAATTACTTCAACAGAAGGAAAAGAGAAAGGAGATTGAAGATGCTATTACTAAGAAGAGGAGAAGGCCAATTGAGTATGGAGAATCAAGTAATGGTGGCGATGGAAGGAGTAGTGTTCGATATGGATTTGAAGTGTCAGAGTTGGAAATGTTGGCTATGGAAATGCAGGGTCTTGGAAGAGGTGGTGGAGAACATGAGGAAGAGATTGAGGTTCTGCAGCTGTTGATTGGACAAGAACCTCTGGTAGTTGATAGAGATGATTATTAA 960 0.401 MNYLYPVKEEYLEIEATPSSLTYERGSDEGSTVVIPRPMEGLHEVGPPPFLTKTFDVVEDPTTSHIVSWSRGGASFVVWDPNAFSRDLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFLRGHKHLLANIKRRRQTSQPSTSQQQSSHSQGHCVEVGRFGLDEEIDHLRRDKQVLMMELVKLRQQQHNTRSILQAMEERLRGTEIKQQQMMAFLARAMKNPAFIQQLLQQKEKRKEIEDAITKKRRRPIEYGESSNGGDGRSSVRYGFEVSELEMLAMEMQGLGRGGGEHEEEIEVLQLLIGQEPLVVDRDDY* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2843 319 MobiDBLite consensus disorder prediction 139 158 - -
Mtr7g2843 319 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 20 299 - -
Mtr7g2843 319 Gene3D - 43 140 IPR036388 -
Mtr7g2843 319 SMART hsfneu3 46 139 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2843 319 Pfam HSF-type DNA-binding 50 139 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2843 319 ProSitePatterns HSF-type DNA-binding domain signature. 89 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2843 319 Coils Coil 233 253 - -
Mtr7g2843 319 Coils Coil 171 205 - -
Mtr7g2843 319 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 299 IPR027725 -
Mtr7g2843 319 SUPERFAMILY "Winged helix" DNA-binding domain 46 139 IPR036390 -
Mtr7g2843 319 PRINTS Heat shock factor (HSF) domain signature 50 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2843 319 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2843 319 PRINTS Heat shock factor (HSF) domain signature 101 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2843 Mtr-Chr7 45186434 45191696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2843 24 302 HSF AT3G22830 59.283 3.74e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mtr7g2843 HSF_DNA-bind 7.2e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2843 K09419 - gmx:100794264 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2843 7 45186434 45191696 Mtr1g2480 1 35580833 35583049 PCT