Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2835 ATGGAGCAGTATGAAGTTCTAGAACAGATTGGTAAAGGTGCATTTGGTTGTGCTTTACTTGTGAGGCACAAGCATGAAAAGAAAAAGTATGTCCTCAAGAAGATCCGTCTTGCTCGCCAAACTGACAGAACCCGTAGGTCGGCCCATCAGGAGATGGAGCTTATATCTAAAGTTCGCAATCCCTTTATTGTGGAGTATAAAGATTCTTGGGTAGAAAAGGGTTGTTTTGTATGTATTATCATCGGCTATTGCGAAGGAGGGGATATGGCCGAAACTGTAAAAAAGGCCAATGGTGTTAACTTTCCTGAAGAGAAACTCTGCAAGTGGCTTGTCCAGTTACTGATGGCTCTTGATTACTTACATGTAAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAGAATCAAGATATACGTCTAGGAGACTTTGGTCTTGCTAAACTGTTGACATCTGATGATCTTGCTTCCTCAATTGTTGGGACTCCAAGTTATATGTGCCCAGAGCTTCTAGCGGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGATGCTGTGTTTACGAAATGGCTGCTCACAGGCCAGCTTTTAAAGCTTTTGACATACAAGCTTTGATTCACAAAATAAACAAGTCTATTGTATCTCCACTGCCAACTATGTACTCTAGTGCTTTCCGAGGGCTTGTCAAAAGTATGCTGCGGAAAAATCCAGAGCTAAGGCCAACTGCTGGAGAGTTACTAAATCATCCACATCTGCAGCCTTACATTCTTAAAATTCACCAAAAATTAAATAGCCCCAGAAGAAGTGCTTTTCCGCTCCAATGGCCCGATTCAAACTATGGTAGGAGAACTCGATTTATGGAGCCGGAATCTGTTTCTACTCTTTCTGACCAAGACAGATACCTGTCACTAAACAATCACAGGGCCTTGAATCCTAGTATTTCTGGAACTGAACAAAGTTCTCAATATTCTATGCAAAGAGGTCAAGGATTATCCACTTGTTCAGAAGAGAAGCTCTACAACTTATCTGCTGGTGGTGTCCGTGATTACTGCAATACTAACAAATCAAAAGCCATAAAGTCCTCAACTGGTGAGAGAACACCAAGACTTAGAATAGCTAAGGATTCTTCCGCTGCCAGAAGGCAGACACCGCCACCACCAAAGATCCATGTTACTGGTCCAAAGCGTGAATCGCTTCCGGTACCTCGAGCACCATCGGGTAAGTCTGCCATGCCAACTCGGAGAGCATCCCTTCCGCTTCACACAAGAGGAAGGAACACAACAAGCTTCTACACCAATGTTGATTACGCAGACTCTCCAAATGTTTCTGTTGATGCACCTCAGATTGACAAGATGGCAGAATTCTCAACAGCCTCTTATGAGGATCCATTCTTCCATGTCATTCGAAGATCATCAACAGCATCAGCCAAACACTCTTCTACCTCAACAGGGAGTGCTGATTGCACAATCACAAAGGACAAGTGTACAATCCTGGTGGACAAAAAAGTTACTGTCCCCACCAGCATCACTGATGCTGGCACTGATGTTCGATTTCCAAAGGGCAGTGCCAGTGAATGCTCTAACTATGTTACAACCGGTGTTTCAAGCCGTTCCTCATCCGAGTCACGTCAGCATCGGTTTGACACATCATCGTACCAGCAACGTGCTGAGGCATTGGAGGGGCTGCTAGAGTTCAGTTCTAGACTGCTACAACAACATAGGTTTGACGAGCTTGGTGTATTGCTGAAGCCATTTGGGCCTGAGAAGGTTTCTCCAAGGGAAACAGCTATTTGGTTGGCCAAGAGCTTTAAACAAAACAGTGATCTAAGGTTTCCTCATACACTTGCATGA 1869 0.4371 MEQYEVLEQIGKGAFGCALLVRHKHEKKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAETVKKANGVNFPEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKNQDIRLGDFGLAKLLTSDDLASSIVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHRPAFKAFDIQALIHKINKSIVSPLPTMYSSAFRGLVKSMLRKNPELRPTAGELLNHPHLQPYILKIHQKLNSPRRSAFPLQWPDSNYGRRTRFMEPESVSTLSDQDRYLSLNNHRALNPSISGTEQSSQYSMQRGQGLSTCSEEKLYNLSAGGVRDYCNTNKSKAIKSSTGERTPRLRIAKDSSAARRQTPPPPKIHVTGPKRESLPVPRAPSGKSAMPTRRASLPLHTRGRNTTSFYTNVDYADSPNVSVDAPQIDKMAEFSTASYEDPFFHVIRRSSTASAKHSSTSTGSADCTITKDKCTILVDKKVTVPTSITDAGTDVRFPKGSASECSNYVTTGVSSRSSSESRQHRFDTSSYQQRAEALEGLLEFSSRLLQQHRFDELGVLLKPFGPEKVSPRETAIWLAKSFKQNSDLRFPHTLA* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2835 622 SUPERFAMILY Protein kinase-like (PK-like) 1 331 IPR011009 -
Mtr7g2835 622 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2835 622 CDD STKc_Nek 3 258 - -
Mtr7g2835 622 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mtr7g2835 622 MobiDBLite consensus disorder prediction 368 382 - -
Mtr7g2835 622 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2835 622 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mtr7g2835 622 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2835 622 Gene3D Transferase(Phosphotransferase) domain 1 86 326 - -
Mtr7g2835 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mtr7g2835 622 MobiDBLite consensus disorder prediction 364 420 - -
Mtr7g2835 622 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 603 - -
Mtr7g2835 622 Coils Coil 621 622 - -
Mtr7g2835 622 PANTHER SERINE/THREONINE-KINASE NEK4 1 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2835 Mtr-Chr7 45096161 45102686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2835 10 259 MAP Kinase Kinase Kinase AT1G53570 31.765 2.24e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mtr7g2835 Pkinase 1.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2835 K08857 - gmx:100810347 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2835 7 45096161 45102686 Mtr7g2835 7 45096161 45102686 ECH
Mtr7g2835 7 45096161 45102686 Mtr1g2487 1 35633159 35637867 PCT