Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2807 ATGGATCTTCGTAACAACACCCAAAGTTTGAAGAGAAAACTCGATTGGACTGAAGAAGATGAAGTAGAAGAAGTAACAACCAAACCTCGTCGTTTAGATCTTCCCACTGATATTTCCAATCGTATTCATCTTCTCAAATCCTCTTTTTCATCTTCTTGTTCAGATCGTTCTTCTGCTAATTGTGCTCTCTTTGTCCTTTCCGAATTCGCCAAAGACGAGGATATTGTTGATGTTATAGTCAATTGCGGTGCTGTTCCTGTTCTGGTGGAGATTCTGGAGACGGCCGGAGATTGTGATGCTGATTCTTATAAGTATGATATGGAGAAGGATTGTGCGTTCATCCTTGGTCTCCTCGCTGTCAAACCAGAGTATCAACGACTCATCGTTGATGCTGGAGCCTTGTCCTATCTCGTAGAGTTGTTAAAGAGACCCAAAAGCCCTGTAATTTCTCAAGCACTTTTTTCTGGTCTTCTTAGGAGAGCAGCCGATGCAATAACCAGCCTTGCCCATGAAAATACCAACATTAAGACCCTTGTCAGGTTGGACGGTGGTATCCCTCCTCTTGTTGAATTGCTTGAATTCAATGATACAAAGGTACAGAGAGCAGCTGCAGGTGCCTTGCGGACTCTCGCATTTCAAAATGCTGAGAACAAAAATCAGATTATTGAATGCAATGCGTTGCCAACTCTTGTACTAATGCTTGGATCAGCAGATGCCTCAATACATTATGAAGCGGTTGGCGTGATTGGAAATCTGGTCCATTCTTCGCCAGAAATTAAGAGAGAAGTTCTTCTGGCTGGGGCATTACAGCCAGTTATTTGCTTACTAAGCTCCTGCTGTTTGGAGAGCCGAAGAGAAGCAGCTCTTTTAATTGGTCAATTTGCTACAACGGATTCAGATTGCAAGATTCACATTGCCCAAAGAGGGGCTATAAACCCCTTAATTGAGATGCTTAAGTCTTCAGATTTACAGCTTAGGGAAATGTCAACTTTTGCACTTGGGAGGTTGGCACAGGACTCACACAATCAAGCTGGTATTGCTTATAATGGAGGTATAGAGCCTCTGCTTGATCTTCTTGACACAAAGAATGGTTCCGTTCAACACAACGCAGCTTTTGCTCTCTATGGTCTGGCTGATAATGAGGACAATGTTGCGGTTATAATTAAGGCTGGTGGTTTTCAAAAACTGCATGATGGACATTTCAACGCTCAACCTACTCAAGAGTGTGTAACAAAGACGTTAAAAAGATTGGAAGAGAAGATGCAAGGGCGAGTACTGAAACACATGTTATATCTTATGCGCACTGGGGAAAAGGATCTTCAAATACGTGTAGCTCTTGCTCTTGCACATTTATGTTCCCCTGATGATCGGAAAACTATATTTATTGACAATAATGGATTAGAACTGCTGTTGAATCTTCTCCAATCTACAAACCCAAAGCAGAAAGGTGATGCTTCAGCAGCGCTTCACACAATGGCTATGAAAGACATGTGTTCCTCTATTGTTGATCCTGCTCCTACATCACCAACTCCCCAGGTTTACTTGGGTGAGCAATACGTAAACAATCCTAAACTTTCTGATGTCACATTCATAGTTGAAGGCAAAAGCTTTTATGCTCATAGAGTTTGTTTACTTTCTTCTTCTGATACATTTCGTGCAATGTTTGATGGGGGCTATAGGGAAAAGGAAGCCAAAAATATAGAGATTCCAAATATTAAATGGGATGTCTTTGAGTTGATGATGAGATATATATACACTGGAGCAGTAGATATTGATTTGGATCTTGCTCCGGACCTCCTTAAAGCTGCAGATCAATATCTTCTTGATGGTCTTAAGAGTCTTTGCGAATATGCTATTTCTGAGGATATTTCTGTGGAAAATGTTTCACAGATGTATGTGATGTCAGACACTTTTAATGCTACATCATTAAGATATGCATGCATACTCTTTGTCCTGGAGCAATTTGATAATCTGAGTACCAAACCATGGTATCGTCGCTTTCTTCATTGCATTGTACCAGACATTCACAAATTCTTCTCAACTCTTCTTACCCACCCTCATTTGGCTAACTTGTGCCGTCGTGCGGATCCTTAG 2094 0.4126 MDLRNNTQSLKRKLDWTEEDEVEEVTTKPRRLDLPTDISNRIHLLKSSFSSSCSDRSSANCALFVLSEFAKDEDIVDVIVNCGAVPVLVEILETAGDCDADSYKYDMEKDCAFILGLLAVKPEYQRLIVDAGALSYLVELLKRPKSPVISQALFSGLLRRAADAITSLAHENTNIKTLVRLDGGIPPLVELLEFNDTKVQRAAAGALRTLAFQNAENKNQIIECNALPTLVLMLGSADASIHYEAVGVIGNLVHSSPEIKREVLLAGALQPVICLLSSCCLESRREAALLIGQFATTDSDCKIHIAQRGAINPLIEMLKSSDLQLREMSTFALGRLAQDSHNQAGIAYNGGIEPLLDLLDTKNGSVQHNAAFALYGLADNEDNVAVIIKAGGFQKLHDGHFNAQPTQECVTKTLKRLEEKMQGRVLKHMLYLMRTGEKDLQIRVALALAHLCSPDDRKTIFIDNNGLELLLNLLQSTNPKQKGDASAALHTMAMKDMCSSIVDPAPTSPTPQVYLGEQYVNNPKLSDVTFIVEGKSFYAHRVCLLSSSDTFRAMFDGGYREKEAKNIEIPNIKWDVFELMMRYIYTGAVDIDLDLAPDLLKAADQYLLDGLKSLCEYAISEDISVENVSQMYVMSDTFNATSLRYACILFVLEQFDNLSTKPWYRRFLHCIVPDIHKFFSTLLTHPHLANLCRRADP* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2807 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 350 392 IPR000225 GO:0005515
Mtr7g2807 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 218 IPR000225 GO:0005515
Mtr7g2807 697 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 5 694 IPR044282 -
Mtr7g2807 697 Gene3D - 422 505 IPR011989 -
Mtr7g2807 697 Gene3D - 261 421 IPR011989 -
Mtr7g2807 697 SUPERFAMILY POZ domain 517 620 IPR011333 -
Mtr7g2807 697 ProSiteProfiles BTB domain profile. 526 593 IPR000210 GO:0005515
Mtr7g2807 697 Pfam BTB/POZ domain 518 621 IPR000210 GO:0005515
Mtr7g2807 697 SUPERFAMILY ARM repeat 420 495 IPR016024 -
Mtr7g2807 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 225 267 IPR000225 GO:0005515
Mtr7g2807 697 Pfam Armadillo/beta-catenin-like repeat 214 253 IPR000225 GO:0005515
Mtr7g2807 697 Pfam Armadillo/beta-catenin-like repeat 183 211 IPR000225 GO:0005515
Mtr7g2807 697 Gene3D - 33 153 IPR011989 -
Mtr7g2807 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 309 351 IPR000225 GO:0005515
Mtr7g2807 697 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 5 694 - -
Mtr7g2807 697 SUPERFAMILY ARM repeat 53 397 IPR016024 -
Mtr7g2807 697 SMART BTB_4 526 623 IPR000210 GO:0005515
Mtr7g2807 697 Gene3D Potassium Channel Kv1.1; Chain A 514 652 IPR011333 -
Mtr7g2807 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 132 183 IPR000225 GO:0005515
Mtr7g2807 697 Gene3D - 154 260 IPR011989 -
Mtr7g2807 697 SMART arm_5 121 170 IPR000225 GO:0005515
Mtr7g2807 697 SMART arm_5 256 296 IPR000225 GO:0005515
Mtr7g2807 697 SMART arm_5 339 379 IPR000225 GO:0005515
Mtr7g2807 697 SMART arm_5 454 494 IPR000225 GO:0005515
Mtr7g2807 697 SMART arm_5 298 338 IPR000225 GO:0005515
Mtr7g2807 697 SMART arm_5 214 254 IPR000225 GO:0005515
Mtr7g2807 697 SMART arm_5 72 120 IPR000225 GO:0005515
Mtr7g2807 697 SMART arm_5 172 212 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2807 Mtr-Chr7 44763841 44769082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2807 192 467 U-box Gene Family AT3G46510 26.812 3.50e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr7g2807 BTB 7.6e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2807 - - csin:114287792 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2807 7 44763841 44769082 Mtr7g2807 7 44763841 44769082 ECH