Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr7g2807 | ATGGATCTTCGTAACAACACCCAAAGTTTGAAGAGAAAACTCGATTGGACTGAAGAAGATGAAGTAGAAGAAGTAACAACCAAACCTCGTCGTTTAGATCTTCCCACTGATATTTCCAATCGTATTCATCTTCTCAAATCCTCTTTTTCATCTTCTTGTTCAGATCGTTCTTCTGCTAATTGTGCTCTCTTTGTCCTTTCCGAATTCGCCAAAGACGAGGATATTGTTGATGTTATAGTCAATTGCGGTGCTGTTCCTGTTCTGGTGGAGATTCTGGAGACGGCCGGAGATTGTGATGCTGATTCTTATAAGTATGATATGGAGAAGGATTGTGCGTTCATCCTTGGTCTCCTCGCTGTCAAACCAGAGTATCAACGACTCATCGTTGATGCTGGAGCCTTGTCCTATCTCGTAGAGTTGTTAAAGAGACCCAAAAGCCCTGTAATTTCTCAAGCACTTTTTTCTGGTCTTCTTAGGAGAGCAGCCGATGCAATAACCAGCCTTGCCCATGAAAATACCAACATTAAGACCCTTGTCAGGTTGGACGGTGGTATCCCTCCTCTTGTTGAATTGCTTGAATTCAATGATACAAAGGTACAGAGAGCAGCTGCAGGTGCCTTGCGGACTCTCGCATTTCAAAATGCTGAGAACAAAAATCAGATTATTGAATGCAATGCGTTGCCAACTCTTGTACTAATGCTTGGATCAGCAGATGCCTCAATACATTATGAAGCGGTTGGCGTGATTGGAAATCTGGTCCATTCTTCGCCAGAAATTAAGAGAGAAGTTCTTCTGGCTGGGGCATTACAGCCAGTTATTTGCTTACTAAGCTCCTGCTGTTTGGAGAGCCGAAGAGAAGCAGCTCTTTTAATTGGTCAATTTGCTACAACGGATTCAGATTGCAAGATTCACATTGCCCAAAGAGGGGCTATAAACCCCTTAATTGAGATGCTTAAGTCTTCAGATTTACAGCTTAGGGAAATGTCAACTTTTGCACTTGGGAGGTTGGCACAGGACTCACACAATCAAGCTGGTATTGCTTATAATGGAGGTATAGAGCCTCTGCTTGATCTTCTTGACACAAAGAATGGTTCCGTTCAACACAACGCAGCTTTTGCTCTCTATGGTCTGGCTGATAATGAGGACAATGTTGCGGTTATAATTAAGGCTGGTGGTTTTCAAAAACTGCATGATGGACATTTCAACGCTCAACCTACTCAAGAGTGTGTAACAAAGACGTTAAAAAGATTGGAAGAGAAGATGCAAGGGCGAGTACTGAAACACATGTTATATCTTATGCGCACTGGGGAAAAGGATCTTCAAATACGTGTAGCTCTTGCTCTTGCACATTTATGTTCCCCTGATGATCGGAAAACTATATTTATTGACAATAATGGATTAGAACTGCTGTTGAATCTTCTCCAATCTACAAACCCAAAGCAGAAAGGTGATGCTTCAGCAGCGCTTCACACAATGGCTATGAAAGACATGTGTTCCTCTATTGTTGATCCTGCTCCTACATCACCAACTCCCCAGGTTTACTTGGGTGAGCAATACGTAAACAATCCTAAACTTTCTGATGTCACATTCATAGTTGAAGGCAAAAGCTTTTATGCTCATAGAGTTTGTTTACTTTCTTCTTCTGATACATTTCGTGCAATGTTTGATGGGGGCTATAGGGAAAAGGAAGCCAAAAATATAGAGATTCCAAATATTAAATGGGATGTCTTTGAGTTGATGATGAGATATATATACACTGGAGCAGTAGATATTGATTTGGATCTTGCTCCGGACCTCCTTAAAGCTGCAGATCAATATCTTCTTGATGGTCTTAAGAGTCTTTGCGAATATGCTATTTCTGAGGATATTTCTGTGGAAAATGTTTCACAGATGTATGTGATGTCAGACACTTTTAATGCTACATCATTAAGATATGCATGCATACTCTTTGTCCTGGAGCAATTTGATAATCTGAGTACCAAACCATGGTATCGTCGCTTTCTTCATTGCATTGTACCAGACATTCACAAATTCTTCTCAACTCTTCTTACCCACCCTCATTTGGCTAACTTGTGCCGTCGTGCGGATCCTTAG | 2094 | 0.4126 | MDLRNNTQSLKRKLDWTEEDEVEEVTTKPRRLDLPTDISNRIHLLKSSFSSSCSDRSSANCALFVLSEFAKDEDIVDVIVNCGAVPVLVEILETAGDCDADSYKYDMEKDCAFILGLLAVKPEYQRLIVDAGALSYLVELLKRPKSPVISQALFSGLLRRAADAITSLAHENTNIKTLVRLDGGIPPLVELLEFNDTKVQRAAAGALRTLAFQNAENKNQIIECNALPTLVLMLGSADASIHYEAVGVIGNLVHSSPEIKREVLLAGALQPVICLLSSCCLESRREAALLIGQFATTDSDCKIHIAQRGAINPLIEMLKSSDLQLREMSTFALGRLAQDSHNQAGIAYNGGIEPLLDLLDTKNGSVQHNAAFALYGLADNEDNVAVIIKAGGFQKLHDGHFNAQPTQECVTKTLKRLEEKMQGRVLKHMLYLMRTGEKDLQIRVALALAHLCSPDDRKTIFIDNNGLELLLNLLQSTNPKQKGDASAALHTMAMKDMCSSIVDPAPTSPTPQVYLGEQYVNNPKLSDVTFIVEGKSFYAHRVCLLSSSDTFRAMFDGGYREKEAKNIEIPNIKWDVFELMMRYIYTGAVDIDLDLAPDLLKAADQYLLDGLKSLCEYAISEDISVENVSQMYVMSDTFNATSLRYACILFVLEQFDNLSTKPWYRRFLHCIVPDIHKFFSTLLTHPHLANLCRRADP* | 698 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr7g2807 | 697 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 350 | 392 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 183 | 218 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | PANTHER | ARM REPEAT PROTEIN INTERACTING WITH ABF2 | 5 | 694 | IPR044282 | - | |
Mtr7g2807 | 697 | Gene3D | - | 422 | 505 | IPR011989 | - | |
Mtr7g2807 | 697 | Gene3D | - | 261 | 421 | IPR011989 | - | |
Mtr7g2807 | 697 | SUPERFAMILY | POZ domain | 517 | 620 | IPR011333 | - | |
Mtr7g2807 | 697 | ProSiteProfiles | BTB domain profile. | 526 | 593 | IPR000210 | GO:0005515 | |
Mtr7g2807 | 697 | Pfam | BTB/POZ domain | 518 | 621 | IPR000210 | GO:0005515 | |
Mtr7g2807 | 697 | SUPERFAMILY | ARM repeat | 420 | 495 | IPR016024 | - | |
Mtr7g2807 | 697 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 225 | 267 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | Pfam | Armadillo/beta-catenin-like repeat | 214 | 253 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | Pfam | Armadillo/beta-catenin-like repeat | 183 | 211 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | Gene3D | - | 33 | 153 | IPR011989 | - | |
Mtr7g2807 | 697 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 309 | 351 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | PANTHER | ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN | 5 | 694 | - | - | |
Mtr7g2807 | 697 | SUPERFAMILY | ARM repeat | 53 | 397 | IPR016024 | - | |
Mtr7g2807 | 697 | SMART | BTB_4 | 526 | 623 | IPR000210 | GO:0005515 | |
Mtr7g2807 | 697 | Gene3D | Potassium Channel Kv1.1; Chain A | 514 | 652 | IPR011333 | - | |
Mtr7g2807 | 697 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 132 | 183 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | Gene3D | - | 154 | 260 | IPR011989 | - | |
Mtr7g2807 | 697 | SMART | arm_5 | 121 | 170 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | SMART | arm_5 | 256 | 296 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | SMART | arm_5 | 339 | 379 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | SMART | arm_5 | 454 | 494 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | SMART | arm_5 | 298 | 338 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | SMART | arm_5 | 214 | 254 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | SMART | arm_5 | 72 | 120 | IPR000225 | GO:0005515 | |
Mtr7g2807 | 697 | SMART | arm_5 | 172 | 212 | IPR000225 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr7g2807 | Mtr-Chr7 | 44763841 | 44769082 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr7g2807 | 192 | 467 | U-box Gene Family | AT3G46510 | 26.812 | 3.50e-15 | 77.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Mtr7g2807 | BTB | 7.6e-26 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr7g2807 | - | - | csin:114287792 | 887.486 |