Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2793 ATGAACTATCAAATGAATGGTGAAGATGCACGCAGAGATTTAAAAAGAAAGCTCCCTCAGATGGATCGAGGGCAAGAACGGAGACCTTATAATTATAATACGAATTCTACAACTTACGATAGGAATGCGCTTCCTCCTGGTTGGTTAGGCTGCCCAGCACATGGGCAAGAACTAGGATGCATAATCCCTTCAAAGGTTCCACTTGGTGAATCATTCAATGATCACATTCCAAATAATAAATATACTCCCAAGCAAGCAATTCTTCAACAGAGAGCTTTAGGTAGAGAACTTGGTTTAGTGATTGATCTGACAAATACTACTCGTTACTATCCATTATCAGATTGGAGAAAAGAAAGAATACAACATGTCAAGATAAGATGCCAAGGAAGAGATTCTGTACCTGATGACGAATCTGTACAAAAGTTTTGCAATGAGGTTCTGGATTTTCGCTCCCGAAGACCAAACGCAGAGAAATATATACTTGTACATTGCACTCATGGGCATAATCGTACAGGTTATATGATTGTTCATTTTCTTGTGCGTACAGAATCAATTTCTGTCACTGAGGCAATACATAAATTTTCTCAGGCACGTCCTCCAGGAATATACAAGCAGGATTACATCGACTCCTTGTACATGTTTTTTAATGAAAGGAAGCCTGAAAGTCTTGTTTGTCCACAAACTCCAGAATGGAAGAGTCTTCCTGATCCTGACTTTCATGGTGTATCTGTCTCAGCTACTGACAATTATGCAGACATTTTACAGGAGGAGAATATTGTGAGGAATGAAGTAATGACAAATGATGATGTTTTGGGAGATCCTATTCCTTCAAACCAGCTACGTGCAATGCGAGAAGTTTGCTATCAACTGCTCAAGTTGGGCACAGGGGGAAAAGGACTGCATTTTCCCGGATCACACCCTGTTTCTCTGAACAGGGAAAATTTGCAACTCTTAAGACAGAGGTATTACTATGCCACATGGAAAGCTGATGGGACACGGTATATGATGCTAATCACTGGGGATGGATGTTATCTGATTGACAGAAAATTTCTTTTCCAAAGGATCTCTATGCGGTTTCCTTGCAGATACTCTAAAGGGGGTACACCTGAGCGGAATCACCACTACACATTACTAGACGGGGAGATGATTATTGACACGGATCCACATACACATAAGCAAGAAAGAAGATACCTCATTTATGATTTGATAGCAATCAATCAAGTCTCTCTGACACAGATGCCATTCTATGAAAGGTGGAAGTTGCTGGAGAAAGAAGTAATTGAGCCTCGTAACATGGAACGAGAAGCCCTTTCCAAGAGTGCAAGTCCTTACTATATATACGACTTGGAACCTTTTGGTGTAAGGAGGAAGGGTTTTTGGTTACTATCTACTGTGTCAAAGCTCCTTCATAAATTCATTCCAGGCCTCTCACATTCATCAGATGGTCTTGTGTTCCAGGGTTGGGATGATCCGTATGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCTGAGATGAACTCTGTTGATTTCCACTTTGAGGTGGGAGCTGGTAATCGACCCCTTCTTTTTCTGTTTGAACATGGAAAGAAGAAGTTAATGGAAGGGAATACTGTTATTTTTAAAGATGCAGAAGATATTTCTTTCTATTCAGGGAGGATTATTGAGTGCTACTGGGATGCTGCGGAGCATCACTGGGTCTGTATGCGGATCAGAACGGATAAAGCAACTCCAAATGAATTCATTACCTATAAAAAGGTAATGCGAAGCATAAAGGATAATATCACAGAAGAGGTCCTGTTGAATGAGATTAGTGAGATCATTCGACTACCCTTGTATGCGGACAGAATAGACAGGGATATCAAGGCTCACCAGCATATGGTCTCATCACGGCGCAAGTGA 1908 0.4114 MNYQMNGEDARRDLKRKLPQMDRGQERRPYNYNTNSTTYDRNALPPGWLGCPAHGQELGCIIPSKVPLGESFNDHIPNNKYTPKQAILQQRALGRELGLVIDLTNTTRYYPLSDWRKERIQHVKIRCQGRDSVPDDESVQKFCNEVLDFRSRRPNAEKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAIHKFSQARPPGIYKQDYIDSLYMFFNERKPESLVCPQTPEWKSLPDPDFHGVSVSATDNYADILQEENIVRNEVMTNDDVLGDPIPSNQLRAMREVCYQLLKLGTGGKGLHFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITGDGCYLIDRKFLFQRISMRFPCRYSKGGTPERNHHYTLLDGEMIIDTDPHTHKQERRYLIYDLIAINQVSLTQMPFYERWKLLEKEVIEPRNMEREALSKSASPYYIYDLEPFGVRRKGFWLLSTVSKLLHKFIPGLSHSSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFHFEVGAGNRPLLFLFEHGKKKLMEGNTVIFKDAEDISFYSGRIIECYWDAAEHHWVCMRIRTDKATPNEFITYKKVMRSIKDNITEEVLLNEISEIIRLPLYADRIDRDIKAHQHMVSSRRK* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2793 635 Gene3D - 503 612 IPR012340 -
Mtr7g2793 635 CDD Adenylation_mRNA_capping 278 505 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mtr7g2793 635 Pfam mRNA capping enzyme, C-terminal domain 509 603 IPR013846 -
Mtr7g2793 635 MobiDBLite consensus disorder prediction 1 37 - -
Mtr7g2793 635 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 296 505 - -
Mtr7g2793 635 ProSitePatterns Tyrosine specific protein phosphatases active site. 162 172 IPR016130 GO:0016311|GO:0016791
Mtr7g2793 635 SUPERFAMILY Nucleic acid-binding proteins 507 620 IPR012340 -
Mtr7g2793 635 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 44 231 IPR029021 -
Mtr7g2793 635 SMART dsp_5 72 217 IPR020422 GO:0006470|GO:0008138
Mtr7g2793 635 Gene3D DNA ligase/mRNA capping enzyme 266 502 - -
Mtr7g2793 635 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 140 209 IPR000387 GO:0016311|GO:0016791
Mtr7g2793 635 CDD RNA_5'-triphosphatase 47 213 - -
Mtr7g2793 635 Pfam Dual specificity phosphatase, catalytic domain 96 215 IPR000340 GO:0008138|GO:0016311
Mtr7g2793 635 PIRSF mRNA_capping_HCE 30 635 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mtr7g2793 635 Gene3D Protein tyrosine phosphatase superfamily 19 237 IPR029021 -
Mtr7g2793 635 MobiDBLite consensus disorder prediction 8 24 - -
Mtr7g2793 635 Pfam mRNA capping enzyme, catalytic domain 306 504 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mtr7g2793 635 PANTHER MRNA-CAPPING ENZYME 5 635 - -
Mtr7g2793 635 PANTHER MRNA-CAPPING ENZYME-LIKE 5 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2793 Mtr-Chr7 44630780 44639973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2793 27 625 Protein tyrosine phosphatase (PTP) family AT3G09100 61.184 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2793 - K13917 mtr:MTR_7g094670 1299.65