Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2771 ATGAAAATGATTCCTTGGGATGGAATTGGTTGTTACTTTAGTGGAATTGCTCTATACTGTCTCGGAATAACCATTTGCAAGGATGCGGAAATTCTTAAATCTGTGACCCGGGTCAATCAGTTAAAGGAGCTAGAGCAACTACTAGATACTCAAAATTCAGCATTGGTCGTTGCAATTTCTGGAAAAGTTGCATCTGAAAGCACAATTGAATGTGAATTAAGTGGTTTAAAGGGTGTAATTGTGGAAGAAGCGGTAGAACAACATTTTCTCAAACACAAACACAATGATTCCTGGATAAAAGATTCTGCTTTAACGTCGTTCACGAGTAAAGAGATTCCTTGGTATCTGGAAGATTCGACTGATCGTGTGGATGTGGTTGGAGCTCAGTCGGCCAAAGATTTTGTGTTACCTGTTAAACATGAAGTATTTAAACCGTCAAATCCAAGGCTTATAAGTAAAGCATTGCATTATATCCGAGGTCTCAAGGAGCTTGGTTTCAATAGAACTGAACGAACACTTCCTATTGGCACTACCGTAACAGTTGTTGGTGAGATGATGCTGGCGCCATTCGGATTCAACAACCCCGCACAGGACCATTTTATGTCTCTCCCAAAACAATTGATCAGCTTATAA 633 0.3997 MKMIPWDGIGCYFSGIALYCLGITICKDAEILKSVTRVNQLKELEQLLDTQNSALVVAISGKVASESTIECELSGLKGVIVEEAVEQHFLKHKHNDSWIKDSALTSFTSKEIPWYLEDSTDRVDVVGAQSAKDFVLPVKHEVFKPSNPRLISKALHYIRGLKELGFNRTERTLPIGTTVTVVGEMMLAPFGFNNPAQDHFMSLPKQLISL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2771 210 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 3 186 - -
Mtr7g2771 210 PANTHER - 3 186 IPR044231 GO:0004842|GO:0016567
Mtr7g2771 210 Pfam E3 Ubiquitin ligase 88 188 IPR022170 GO:0004842|GO:0006996|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2771 Mtr-Chr7 44390231 44393281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2771 3 210 C3H Transcription Factor Family AT1G63900 49.765 1.99e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2771 K15688 - gmx:100800734 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2771 7 44390231 44393281 Mtr7g2771 7 44390231 44393281 ECH