Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2733 ATGGAGCTGGCTTTGAGCTTAGGCGACACACCAAAAGCATTCTCTTTGTTTGAAAACCCCACAAAATTACCCAACAAAAGTTTCTGCATACCACTTGAAGAACATGGTTTAGCTGAAAAATCCTTAGACCAAAAAATTGATTCCTCAGATCCACGTCCACCCATTCAGCTCAACCTTCTTCCTTCAACACCGGTCCTTCGCTCCCAGCCTTCTCCACTTCTTCGAATTCCCTGGCTCAACAGTGCAATTGGTGTGGAACCGGCGAGGGTGTCGGACGTGAACCAATTCCGGTTGGCGTCAGTGGAGGATACTACCGACGAGGGAGCTGCAGTTTCATCCCCGAATAGTGCAGCGTCATATTATCAGATGGATTTTTCTATAATGAATGGTAATGGAGATGCTGAAGCCAGAAACAGTAGTCGAGAAGAGGGTGCGGATAGAAATACTAGCGATGATGAAGAAAATGGGTCAACAAGGAAGAAACTCAGACTCTCTAAGGAACAATCAGCTTTTCTTGAAGATAGCTTCAAAGAACACACCACTCTCAATCCTAAACAGAAACTGGCTCTGGCAAAGCAATTAAATCTTCGTCCACGTCAAGTAGAAGTTTGGTTTCAGAATAGAAGAGCAAGGACCAAGTCAAAGCAAACGGAAGTGGATTGTGAATACTTAAAAAGATGTTGTGAGACTCTGACAGAAGAAAATAAAAGATTACAAAAGGAACTTCAGGAATTGAGAGCTTTGAAAACTTCTCAACCATTCTACATGCAACTTCCAGCTACCACTCTCACTATGTGTCCTTCTTGTGAAAGGGTCGCCACCAACACCACCGGAACCACCACCACTAAACAAACCACCTCGATTACCACCGGTGGGCACCGCCAACAATAA 891 0.4444 MELALSLGDTPKAFSLFENPTKLPNKSFCIPLEEHGLAEKSLDQKIDSSDPRPPIQLNLLPSTPVLRSQPSPLLRIPWLNSAIGVEPARVSDVNQFRLASVEDTTDEGAAVSSPNSAASYYQMDFSIMNGNGDAEARNSSREEGADRNTSDDEENGSTRKKLRLSKEQSAFLEDSFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKSKQTEVDCEYLKRCCETLTEENKRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNTTGTTTTKQTTSITTGGHRQQ* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2733 296 MobiDBLite consensus disorder prediction 136 164 - -
Mtr7g2733 296 ProSitePatterns 'Homeobox' domain signature. 190 213 IPR017970 GO:0000981|GO:0006355
Mtr7g2733 296 SMART halz 215 258 IPR003106 GO:0006355|GO:0043565
Mtr7g2733 296 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 2 294 - -
Mtr7g2733 296 PANTHER - 2 294 - -
Mtr7g2733 296 SMART HOX_1 157 219 IPR001356 GO:0003677
Mtr7g2733 296 MobiDBLite consensus disorder prediction 131 164 - -
Mtr7g2733 296 Gene3D - 163 213 - -
Mtr7g2733 296 MobiDBLite consensus disorder prediction 277 296 - -
Mtr7g2733 296 Coils Coil 221 251 - -
Mtr7g2733 296 CDD homeodomain 159 216 IPR001356 GO:0003677
Mtr7g2733 296 Pfam Homeobox associated leucine zipper 215 249 IPR003106 GO:0006355|GO:0043565
Mtr7g2733 296 SUPERFAMILY Homeodomain-like 149 217 IPR009057 -
Mtr7g2733 296 Pfam Homeodomain 159 213 IPR001356 GO:0003677
Mtr7g2733 296 ProSiteProfiles 'Homeobox' domain profile. 155 215 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2733 Mtr-Chr7 44000098 44002048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2733 151 282 Homeobox Transcription Factor Family AT4G37790 77.273 4.18e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr7g2733 Homeodomain 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2733 K09338 - qsu:112028347 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2733 7 44000098 44002048 Mtr7g2733 7 44000098 44002048 ECH
Mtr7g2733 7 44000098 44002048 Mtr1g1832 1 27065547 27067874 PCT