Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2732 ATGGCCGAAGAAAATTCTGATGCTATGAACCTTGATTTGAATCTGGGTCCAGACCCGGAACCACAAACTGGGTCGTTAGGGAATGAAGGTTTGAACTTGGATCATTGGATTGAGGAGCCGCTTCAACGAATTAGCGAAGCTGCTGCGAGGCTTAGGGGGAGACAGAGGTGGAGATGGAGGCAACTTTCTCCTCCTTATCCACAACAGCTTCAGAGGGTTCTACCTCAGCCGTCTTATCATCAAGTTCATCAACTTGCTCCTGCACCCCATATTTATATCCCACCTGAAGCACGCAATATTTCAATTGAATTGAACAATTTTTTGGTCAATTCGGGGAATGGAATTGGATTACAGGCTGGGGAAGGAAGTGTGGCTGCTGTGGAGAGAATGGAGGAAGAAGAGGCGCCGCTGAAAGCTTGTGAGAATAACAATGGTGTTATGGAGGATGAGACCTTGCAGAAGAATAAGGATGATGTTGAAAAGGCTGGTGGCGGTGATGGGGACTTTTTTGATTGTAATATCTGTTTGGATTTGGCCAAGGAGCCTGTTTTGACTTGCTGTGGCCATCTGTTTTGTTGGCAGTGCTTATATCGATGGCTGCATCTGCATTCAGATGCTAGGGAATGTCCAGTTTGCAAGGGAGAGGTGACAATTAAGAGTGTTACCCCTATATACGGTCGTGGAAACAGTACCCGTGTTCTTGAGGAGGATTCCACTCTAAAAATCCCTCCTAGGCCACAAGCAAAGCGTGTTGAGAGTCTGAGACAAACCCTTCAGAGAAATGCATTTGCTTTCCCTGTGGAGGAGATGATTCGGCGTCTTGGAAACAGAATTGATCTCGCTAGGGATTTATCTCAGCCAAATGAACCAGAAAATGCTCGTGGAACAGCAGAGAGAACTACCTCTTTGCTAAGTAGGTTTTTGACATCTCGAGGCATGCGAAGAGAGCAGAATCCTGTGCCACCCCCGGATGATGCTGCGAGTTTGAATCAGAACAATGATACTGGTGCTGAGTTGGGAGGGGATACCCGCAGGGTGCAATCCCTTTTGCTTCGAAGATCACAATCACATAGAGCAACACTTTCAACTCTTTCATCAGCACTTACTTCTGCTGAAAGGTTGGTTGAGGCATATTTCCGTAGCAATCCATTGGGCAGAAACCAAGAACAACCACCTCCTTCAGGTGATGACAGGGATTCCTTTTCAAGCATTGCTGCTGTCATAAATTCCGAGAGCCAAGTGGACACTGCTGTAGAAATTGATTCCATGGTAACCTCTTCTAGGAGGAGAACAGATGCTTCAAGATTGTCTGATGTGGACAGTGGAGATTCTCGTGCTCCAAGGCGCAGACGTCTGAACTGA 1362 0.4677 MAEENSDAMNLDLNLGPDPEPQTGSLGNEGLNLDHWIEEPLQRISEAAARLRGRQRWRWRQLSPPYPQQLQRVLPQPSYHQVHQLAPAPHIYIPPEARNISIELNNFLVNSGNGIGLQAGEGSVAAVERMEEEEAPLKACENNNGVMEDETLQKNKDDVEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKGEVTIKSVTPIYGRGNSTRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFPVEEMIRRLGNRIDLARDLSQPNEPENARGTAERTTSLLSRFLTSRGMRREQNPVPPPDDAASLNQNNDTGAELGGDTRRVQSLLLRRSQSHRATLSTLSSALTSAERLVEAYFRSNPLGRNQEQPPPSGDDRDSFSSIAAVINSESQVDTAVEIDSMVTSSRRRTDASRLSDVDSGDSRAPRRRRLN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2732 453 MobiDBLite consensus disorder prediction 422 453 - -
Mtr7g2732 453 SMART ring_2 172 212 IPR001841 -
Mtr7g2732 453 ProSitePatterns Zinc finger RING-type signature. 187 196 IPR017907 -
Mtr7g2732 453 ProSiteProfiles Zinc finger RING-type profile. 172 213 IPR001841 -
Mtr7g2732 453 MobiDBLite consensus disorder prediction 425 453 - -
Mtr7g2732 453 MobiDBLite consensus disorder prediction 383 400 - -
Mtr7g2732 453 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 226 IPR013083 -
Mtr7g2732 453 PANTHER OS01G0830200 PROTEIN 13 431 - -
Mtr7g2732 453 MobiDBLite consensus disorder prediction 324 338 - -
Mtr7g2732 453 CDD RING-HC_AtRMA_like 170 214 - -
Mtr7g2732 453 MobiDBLite consensus disorder prediction 381 400 - -
Mtr7g2732 453 SUPERFAMILY RING/U-box 168 225 - -
Mtr7g2732 453 MobiDBLite consensus disorder prediction 1 26 - -
Mtr7g2732 453 MobiDBLite consensus disorder prediction 308 341 - -
Mtr7g2732 453 Pfam Zinc finger, C3HC4 type (RING finger) 172 212 - -
Mtr7g2732 453 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 13 431 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2732 Mtr-Chr7 43979786 43983195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2732 1 444 C3H Transcription Factor Family AT3G58030 53.017 5.11e-132 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2732 K10666 - gmx:100811099 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2732 7 43979786 43983195 Mtr7g2732 7 43979786 43983195 ECH