Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2715 ATGGATATGCGCAAGAGAGGAAGACCCGAACATGGATTCAACAACAATGGGGGATTCAAGAAATCCAGACATGAAATGGAGTCCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGTACCAAGTTTTTCAGCACTTCTGGCTGCCCATTTGGTGAGAGCTGCCACTTCTTGCACCATGTTCCTGGCGGTTATAATGCTGTTTCCCAGATGATGAATCTAACACCTGCAGCACCTCCTGCACCCAGAAATGTTCCAGCCCCACGAAATGCACATGCACCCAATGGGTCTGCACCATCTGCTGTTAAAAGCCGCATATGCAGCAAGTTTAATACTGCTGAAGGCTGCAAATTTGGTGACAAATGCCATTTCGCACACGGAGAATGGGAACTTGGTAAGCCTGTTGCTCCATCATTTGATGATCACCGTCACAATGACCACCGTCACATGGGACCCCCCAATGCTGGCCGTTTTGGCGGTCATCGGATGGAGCCTCCTCCTGTTCCAGCTAGCTTTGGTGCCAATGCCACTGCCAAGATCAGTGTTGAAGCCTCCCTGGCTGGAGCTATCATTGGTAAGGGTGGTGTGAACTCAAAACAGATCTGTCGTCAAACTGGTGCCAAACTTGCAATTCGAGAGCATGAAGACCCAAATCTGAAAAACATTGAACTTGTGGGAACATTTGAACAAATTAAGGATGCAAGCAACATGGTGAAGGATTTACTGTTGACCCTGCAAATGTCTGCACCACCTAAATCAAACCAAGGCCCCCCTGGCCATCATGGCGCCCCTGGCCATCATGGAAACAACTTGAAAACAAAGCTGTGTGAGAATTTTGCAAAAGGATCTTGCACTTTTGGAGATAGATGTCATTTTGCACATGGAGCTGTTGAATTGCGTAAATGA 906 0.4746 MDMRKRGRPEHGFNNNGGFKKSRHEMESLSTGVGSKSKPCTKFFSTSGCPFGESCHFLHHVPGGYNAVSQMMNLTPAAPPAPRNVPAPRNAHAPNGSAPSAVKSRICSKFNTAEGCKFGDKCHFAHGEWELGKPVAPSFDDHRHNDHRHMGPPNAGRFGGHRMEPPPVPASFGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLAIREHEDPNLKNIELVGTFEQIKDASNMVKDLLLTLQMSAPPKSNQGPPGHHGAPGHHGNNLKTKLCENFAKGSCTFGDRCHFAHGAVELRK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2715 301 MobiDBLite consensus disorder prediction 77 101 - -
Mtr7g2715 301 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 103 128 IPR000571 GO:0046872
Mtr7g2715 301 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 36 60 IPR000571 GO:0046872
Mtr7g2715 301 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 272 295 IPR000571 GO:0046872
Mtr7g2715 301 SMART kh_6 174 243 IPR004087 GO:0003676
Mtr7g2715 301 SUPERFAMILY CCCH zinc finger 100 132 IPR036855 GO:0046872
Mtr7g2715 301 MobiDBLite consensus disorder prediction 248 268 - -
Mtr7g2715 301 Gene3D K Homology domain, type 1 172 269 IPR036612 GO:0003723
Mtr7g2715 301 ProSiteProfiles Type-1 KH domain profile. 175 238 - -
Mtr7g2715 301 ProSiteProfiles Zinc finger C3H1-type profile. 34 62 IPR000571 GO:0046872
Mtr7g2715 301 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 164 246 IPR036612 GO:0003723
Mtr7g2715 301 SUPERFAMILY CCCH zinc finger 270 300 IPR036855 GO:0046872
Mtr7g2715 301 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 9 301 - -
Mtr7g2715 301 Gene3D - 96 133 - -
Mtr7g2715 301 Gene3D - 270 301 - -
Mtr7g2715 301 ProSiteProfiles Zinc finger C3H1-type profile. 270 297 IPR000571 GO:0046872
Mtr7g2715 301 CDD KH-I 177 239 - -
Mtr7g2715 301 SUPERFAMILY CCCH zinc finger 35 61 IPR036855 GO:0046872
Mtr7g2715 301 MobiDBLite consensus disorder prediction 1 32 - -
Mtr7g2715 301 MobiDBLite consensus disorder prediction 1 27 - -
Mtr7g2715 301 ProSiteProfiles Zinc finger C3H1-type profile. 101 129 IPR000571 GO:0046872
Mtr7g2715 301 Pfam KH domain 178 239 IPR004088 GO:0003723
Mtr7g2715 301 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 9 301 - -
Mtr7g2715 301 SMART c3hfinal6 103 128 IPR000571 GO:0046872
Mtr7g2715 301 SMART c3hfinal6 270 296 IPR000571 GO:0046872
Mtr7g2715 301 SMART c3hfinal6 34 61 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2715 Mtr-Chr7 43842694 43846896 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr7g2715 KH_1 5e-11 CL0007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2715 - - mtr:MTR_7g093130 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2715 7 43842694 43846896 Mtr7g2715 7 43842694 43846896 ECH
Mtr7g2715 7 43842694 43846896 Mtr1g1807 1 26636741 26640666 PCT