Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2709 ATGATCGACCTTAGAAAACTGAGATTAACATTCACATTTTTCAATCTCACCAATCTTAAACCCTCCCTAAACCCTAGATTTTACAACACAGCGAAAAAACCAATTCAGTTAAATTCAAAACCTAAAATTCTCTCAAAATTAACCATTAAAGAAGCCCAAGCTGCATTGTTAGAATATCTCCATTCCACAAGAAGCTTGCAGTTTTTAGACGCAGATAACATGTGCAAAAACTCGCCTTTTTTCCTTCAAAATCTCGTCCACAAAACCCTAAAAAACGAGAACTCGATTAACACGAAACGGTTAATTTCTCGCCACCTGCGTTACAACCCTATTAACGAATTTGAACCCTTTTTCGAGAGTTTGGGTTTGAAGCCTTCTGAATATGAATCCTTGCTTCCACGTGATTTGATTTTCCTCAACGATGATCCTCTTTTGATGGCGAATTATCACACTCTGTGTAACTATGGTGTCCCTCGATCCAAAATGGGGAAAATTTTCAAACAAGCGCCGCAAGTTTTTAAATTTGAAAATGGGGTTTTGGTTTCGAAGATTAAGGCTTATGAAGATTTGGGTATTTCGGCCTCGATTTTAGTAAATGCTGTTGCTGTAAGTCCAGGGATTTTGGTTGGTGATGTTAATGTTGAATTTGTTAAGGTTGTTGAGATGTTGAAGAATATTGTTGCAAAGGGTGGTGATGGTGATTTTGATAGTGGTTGGATTCAGTGGCATTATTTGGATGAGGTTTCTTGTAACTGGGGTTTAATGCTTGAGCTATTGTGCTTGCTTTCGGATACTGGTTTCAGTGAGAAACAGTTGGCTGAGATTATTCACCGTAGTCCTTGTATTGTTTTCGAAGAATCAGGAGGTAAGACACTATCGATGATTGGTTTTTTGGTCAAATTTGGATTGTCTGTGAACCAGATTGCCCTCTTGTTTCTCGAGTTTCCACAAATTTTGATGGTCAAGTTTTTCGCCAACTTGAGGGTGTGTCTTCAGCTTCTGACTGAAATTGAGATGGAAGCTAAAGAGATTGGAAAGATTTTCCAGTCTCACACAATACTTGCGGGTTCCAATACTCTAAAGACAACTAAGAGTTTGCTTGGTTGCTTGAATGTAGGCAAGAGGCGTCTATGTAGCATACTGCAGGATAATCCTCATGAAATGAAGAACTGGGTTCTTGGAATAAGAGTTAAGCCTATGGTTGGCTTAAGGGATCTGGAAGAGGAGAAATCGAGGGTGGGGAAGACAGAGTTCTTGTTGCGCTTAGGTTATGTGGAAAACACGAAAGAAATGGATTCGGCGTTTAAGGCATTCAGAGGTAAGGGAGCTGAGCTTCAGGAGAGATTTGATTTTATTGTTAATGCTGGATTGACACGTGATGAAGTTCGTAGAATGATTAGAGTTTCACCTCAGATTCTTAATCAGAACACAGATAGGGTCAAGATGAAAATTGAGTATCTTGTAAAGAAAGGATTTTCTGTATCAGACTTGGTGAATTTTCCATCATATCTTTCCTATAAATCTCCAAGAGTTAAGCTTAGGTTGTCAATGTATAACTGGCTCGTAGACCATGGGGCTGTAACTCCCGGGCTTGCTTTGAGCACCATTATCGCATGCACAGATAATCTATTCTTACAAAGTTATGTAAAACGCCATCCGTCTGGCCTTCAAGTTTGGGAAGAGTTGCAAAAAGAAATTCATTCTGAAGATTCATGA 1716 0.3916 MIDLRKLRLTFTFFNLTNLKPSLNPRFYNTAKKPIQLNSKPKILSKLTIKEAQAALLEYLHSTRSLQFLDADNMCKNSPFFLQNLVHKTLKNENSINTKRLISRHLRYNPINEFEPFFESLGLKPSEYESLLPRDLIFLNDDPLLMANYHTLCNYGVPRSKMGKIFKQAPQVFKFENGVLVSKIKAYEDLGISASILVNAVAVSPGILVGDVNVEFVKVVEMLKNIVAKGGDGDFDSGWIQWHYLDEVSCNWGLMLELLCLLSDTGFSEKQLAEIIHRSPCIVFEESGGKTLSMIGFLVKFGLSVNQIALLFLEFPQILMVKFFANLRVCLQLLTEIEMEAKEIGKIFQSHTILAGSNTLKTTKSLLGCLNVGKRRLCSILQDNPHEMKNWVLGIRVKPMVGLRDLEEEKSRVGKTEFLLRLGYVENTKEMDSAFKAFRGKGAELQERFDFIVNAGLTRDEVRRMIRVSPQILNQNTDRVKMKIEYLVKKGFSVSDLVNFPSYLSYKSPRVKLRLSMYNWLVDHGAVTPGLALSTIIACTDNLFLQSYVKRHPSGLQVWEELQKEIHSEDS* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2709 571 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 32 563 - -
Mtr7g2709 571 PANTHER CGI-12 PROTEIN-RELATED 32 563 IPR003690 GO:0003690|GO:0006355
Mtr7g2709 571 Gene3D Transcription termination factor 3, mitochondrial 289 563 IPR038538 -
Mtr7g2709 571 Gene3D Transcription termination factor 3, mitochondrial 75 229 IPR038538 -
Mtr7g2709 571 Pfam mTERF 260 401 IPR003690 GO:0003690|GO:0006355
Mtr7g2709 571 Pfam mTERF 444 544 IPR003690 GO:0003690|GO:0006355
Mtr7g2709 571 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Mtr7g2709 571 SMART mt_12 309 340 IPR003690 GO:0003690|GO:0006355
Mtr7g2709 571 SMART mt_12 163 193 IPR003690 GO:0003690|GO:0006355
Mtr7g2709 571 SMART mt_12 494 527 IPR003690 GO:0003690|GO:0006355
Mtr7g2709 571 SMART mt_12 463 493 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2709 Mtr-Chr7 43777700 43780490 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr7g2709 mTERF 1.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2709 - - lja:Lj1g3v4317450.1 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2709 7 43777700 43780490 Mtr7g2709 7 43777700 43780490 ECH