Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2705 ATGGCCCAGCAGTGTCAACTCACTTCTCCCTTCCACCTCTTCCTCTTTTGTCCACTTCACTTTTCCACTACCATTCACTCTTCTTTTTTAAATGTTTTCACTTTAACCAAACAACAACAACCACCACCACTCCCCAGACCCCCCCATACTACTATTCTCACACTTCACTTATCTCTCACCAATGAGCACAATCTAGCAACCACCACCAAACCTTACACACCAATGGATTCAGGAGGCAACTCTTCTTCAGAAGAGTCCTCACTTAATGGCTTGAAATTTGGCCAACGAATCTATTTCGAAGATACAGCTCTTACTGCTGCTTCTGCTGCTGCTGCTAGTACTACCATTGCTGCTGGTTCTCCTTCTTCTTCTGGTTCAAAGAAAGGAAGAGGTGGGTCAGTTCAACATTCTCAACCACCTAGGTGTCAAGTTGAAGGATGTAAACTAGATCTGACTGATGCTAAAGCTTACTATTCTAGACACAAAGTTTGTAGCATGCACTCTAAATCCCCTACTGTTACTGTTTCTGGTCTTCAACAAAGGTTTTGTCAACAATGTAGCAGATTTCATCAGCTTGCTGAGTTTGATCAAGGAAAAAGAAGTTGTCGGAGACGACTAGCTGGTCATAATGAGCGTCGCAGAAAGCCCCCACCCAGCTCTCTCTTAACCTCACGTTTTGCCAGGCTTTCTTCGTCTGTTTTTGGTAACAGCGACAGAGGTGGCAGCTTTTTGATGGAATTTGCTTCAAATCCGAAACATAGTCTGAGGAATTCACCCGGAAATCAAACCACAGCAATCGGTTGGCCTTGGCCGGGGAACACGGAGTCGCCATCTAGCAACCTTTTCTTGCAAGGTTCGGTGGGTGGGACAAGCTTCCCTGGTGCCAGGCATCCTCCCGAGGAAACTTACACTGGAGTCACAGATTCAAACTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGTTCTCAAAACACAGAACCAAGTCCTGGATTGAATAACATGCTGAATTTCAACGGGACACCCATGACACAACTTGGTACATCTTCTCATGGTGTAGCCATGCATCAAATTCCAAACAATTACGAGGTTGTCCCTGATCTTGGTCGGGGTCACATTTTGCATCCTCTTGGTAGCCAACACTCTGGCGAGCTTGATCTGTTGCAGCAGGGAAGGAGGCATTATATGGATGTAGAACATTCCAGGGCCTATGAATCTTCTCAGTGGTCACTGTAA 1236 0.4571 MAQQCQLTSPFHLFLFCPLHFSTTIHSSFLNVFTLTKQQQPPPLPRPPHTTILTLHLSLTNEHNLATTTKPYTPMDSGGNSSSEESSLNGLKFGQRIYFEDTALTAASAAAASTTIAAGSPSSSGSKKGRGGSVQHSQPPRCQVEGCKLDLTDAKAYYSRHKVCSMHSKSPTVTVSGLQQRFCQQCSRFHQLAEFDQGKRSCRRRLAGHNERRRKPPPSSLLTSRFARLSSSVFGNSDRGGSFLMEFASNPKHSLRNSPGNQTTAIGWPWPGNTESPSSNLFLQGSVGGTSFPGARHPPEETYTGVTDSNCALSLLSNQTWGSQNTEPSPGLNNMLNFNGTPMTQLGTSSHGVAMHQIPNNYEVVPDLGRGHILHPLGSQHSGELDLLQQGRRHYMDVEHSRAYESSQWSL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2705 411 MobiDBLite consensus disorder prediction 115 140 - -
Mtr7g2705 411 MobiDBLite consensus disorder prediction 67 87 - -
Mtr7g2705 411 ProSiteProfiles Zinc finger SBP-type profile. 139 216 IPR004333 GO:0003677
Mtr7g2705 411 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 76 408 - -
Mtr7g2705 411 Gene3D - 132 203 IPR036893 GO:0003677|GO:0005634
Mtr7g2705 411 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 76 408 IPR044817 GO:0003677
Mtr7g2705 411 MobiDBLite consensus disorder prediction 115 141 - -
Mtr7g2705 411 Pfam SBP domain 142 215 IPR004333 GO:0003677
Mtr7g2705 411 SUPERFAMILY SBT domain 140 221 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2705 Mtr-Chr7 43753849 43757758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2705 91 411 SBP-box Gene Family AT2G42200 43.784 1.18e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mtr7g2705 SBP 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2705 - - gmx:100807165 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2705 7 43753849 43757758 Mtr7g2705 7 43753849 43757758 ECH
Mtr7g2705 7 43753849 43757758 Mtr1g1795 1 26357858 26362714 PCT