Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2683 ATGGATTTGAATTCTCATTATCAGCAACTCCAACAAAACCAACCAAATTCAAGGTTGCTTCGTTTTCGTTCAAGTTTCAAACAACAAGGTGAAGGTTGTGGTGGTAGTGCAACTGCTGCTACAAATTCTGGTGAAACTTCTTCATCTACCTTTAGAGAATTCATGGACCATAACCCTTCTAATCATAAAGTTGACAACAACGAGTCTTCATTATCACAAAGACACATGAATTCTCAGCAGGGTTATAGAATGGATCAACACAAAGGTTTTTATACCAATCTTTTAAGACAAAGTAGTTCTCATGATGGTCATTTCTCCAACAACAACATCATCTCCTTTGGAAATGGGTATGAACCTATGAAAGGTGTTGAAAACTATGATGGGGTGAAGGACAGTGATGGTGAACTTACTCTATCTATGAACATATTAAACAATCAAATTGGCTTCTCACCAAGAACTCCTTCTTCCTTCAGAATGTTATCACAGAACCCTAAAACTGGGAGTGATGGTATTGGAACAACTAGCCACGATGATCGAAGACAAGTAGGTAGCAATGACGACGCTCAATATTATGGTCATAAACTCGTTTATGATTCTAATGACCAGAATGTAGGGGTACGAAATCAAGTTGATACACTATCACATCACTTGAGTTTGCCAAGAAAATCATCAGAAATGTTTGTTGTGGAGAAATTGCTTCAGTTTCCAGATTCTGTTCCTAGCAGTATCAGAGCAAAGAGAGGCTTTGCAACACATCCTAGAAGCCTTGCCGAAAGGGTAAGAAGAACTCGGATAAGTGAACGAATGAGAAAATTGCAAGAGATTGTTCCAAACATTGATAAGCAAACTTGCACATCAGAAATGTTAGACTTGGCTGTAGAGTATATTAAAGATCTTCAAAAACAATTAAAGACTATGAGTGCAAAAAGAGCTAAGTGCAGATGCAGAAACAAGAAATGA 960 0.376 MDLNSHYQQLQQNQPNSRLLRFRSSFKQQGEGCGGSATAATNSGETSSSTFREFMDHNPSNHKVDNNESSLSQRHMNSQQGYRMDQHKGFYTNLLRQSSSHDGHFSNNNIISFGNGYEPMKGVENYDGVKDSDGELTLSMNILNNQIGFSPRTPSSFRMLSQNPKTGSDGIGTTSHDDRRQVGSNDDAQYYGHKLVYDSNDQNVGVRNQVDTLSHHLSLPRKSSEMFVVEKLLQFPDSVPSSIRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQLKTMSAKRAKCRCRNKK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2683 319 Gene3D - 251 319 IPR036638 GO:0046983
Mtr7g2683 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 249 299 IPR011598 GO:0046983
Mtr7g2683 319 MobiDBLite consensus disorder prediction 147 171 - -
Mtr7g2683 319 PANTHER TRANSCRIPTION FACTOR BHLH130 37 318 - -
Mtr7g2683 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 315 IPR036638 GO:0046983
Mtr7g2683 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 318 - -
Mtr7g2683 319 MobiDBLite consensus disorder prediction 147 185 - -
Mtr7g2683 319 MobiDBLite consensus disorder prediction 27 70 - -
Mtr7g2683 319 Coils Coil 296 316 - -
Mtr7g2683 319 MobiDBLite consensus disorder prediction 27 55 - -
Mtr7g2683 319 Pfam Helix-loop-helix DNA-binding domain 255 300 IPR011598 GO:0046983
Mtr7g2683 319 SMART finulus 255 305 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2683 Mtr-Chr7 43566655 43569751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2683 88 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 49.351 1.53e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g2683 HLH 4.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2683 - - mtr:MTR_7g092540 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2683 7 43566655 43569751 Mtr7g2683 7 43566655 43569751 ECH
Mtr7g2683 7 43566655 43569751 Mtr4g1956 4 32930840 32935457 ECH
Mtr7g2683 7 43566655 43569751 Mtr1g1765 1 25254146 25258084 PCT