Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2675 ATGGAGTCGCACGATGAGATGGGATGCCAGGCACCAGAACGTCCAATTCTGTGCGTTAATAATTGTGGTTTCTTCGGAAGGGAAGCTACCATGAACATGTGTTCCAAGTGTTACAAGGACACACTGCTGAAGCAGGAGCAGGAAAAACTTGTTGCGACGTCAGTTGAAAACATCGTGAATGGCAATTCCAGCAGCAATGGAAAGCTGGCTGTGACCGCAAGTGCTGTTGATGTACGAGTTGAAAGTGTGGAGCTCAATACAGTGTCTCCCGAGGTTCCAGAAAATCCAATCTCTAATGAGAGTGTGGAGATGAAAGCCAAGACTGGTCCCAGCAGATGCGCTACTTGCCGGAAACGTGTTGGATTAACTGGCTTCAGCTGCAAATGTGGCAACCTCTTTTGCTCAATGCATCGCTATTCTGATAAACACGATTGCCCTTTTGATTATAGAACTGCTGGTCAGAAGGCCATAGCTGAATCCAACCCAGTAATTAAGGCGGATAAACTCGATAAAATCTAG 519 0.4644 MESHDEMGCQAPERPILCVNNCGFFGREATMNMCSKCYKDTLLKQEQEKLVATSVENIVNGNSSSNGKLAVTASAVDVRVESVELNTVSPEVPENPISNESVEMKAKTGPSRCATCRKRVGLTGFSCKCGNLFCSMHRYSDKHDCPFDYRTAGQKAIAESNPVIKADKLDKI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2675 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Mtr7g2675 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Mtr7g2675 172 Gene3D - 1 67 - -
Mtr7g2675 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 172 - -
Mtr7g2675 172 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 2 2 172 - -
Mtr7g2675 172 Gene3D - 88 168 IPR035896 -
Mtr7g2675 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
Mtr7g2675 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Mtr7g2675 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Mtr7g2675 172 SUPERFAMILY AN1-like Zinc finger 102 167 IPR035896 -
Mtr7g2675 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Mtr7g2675 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2675 Mtr-Chr7 43479144 43481349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2675 5 172 C2H2 Transcription Factor Family AT3G52800 43.275 8.50e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2675 - - mtr:MTR_7g092400 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2675 7 43479144 43481349 Mtr7g2675 7 43479144 43481349 ECH
Mtr7g2675 7 43479144 43481349 Mtr4g1947 4 32689706 32692864 ECH