Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2672 ATGGCTGATAACCCTTACTCTAATCTTTTCTCTTCTTCTTCAAGGTTCTTCCAATTCAACCATATTTTTCCATCTTCAAATTCAAACCCTTCTCCACAAAACCACCACCCTTTTCTTCACCACCACAACAACAATAACCATACCTTTTTCCACTATCATCATCATATTTCCTCTTCTTCACCACCTTCTCCTCCTCTAAGAGAAGAACTACCTCTTTTAAACCTAATTCCAACAAAACAAGAAAAATATGATGAAGATCAACAAGAACATGAGGTGGATATTCAAGACCTTCCTTGCACTGCCATGGATTTAGAAGAAAGGGAAGAAGATGGTAGTAGTAGAACTACTACTGTTACTGTTGCACTTCACATAGGTTTGCCAAACCCTAGTGCTGCTGAAATGGCTTCTGTACTTTCTTCCTCTAATAACTCCTCAGAGATCATTGTCACTGATAAAGAACATGGTGGTGAGGATTCTTGTTCAGGATTCATGGTTAATAATAGGCTTAACAAAGGACAATATTGGATCCCTACTCCTTCTCAGATTCTCATTGGTCCAACTCAGTTCTCTTGCCCTGTTTGCTCCAAAACTTTCAATAGATATAACAACATGCAGATGCATATGTGGGGGCATGGATCACAGTACAGAAAAGGTCCTGAATCTCTAAGAGGTACACAACCAACAGGAATGCTAAGGCTACCTTGTTACTGTTGTGCACCAGGGTGCAGAAACAACATTGATCATCCAAGAGCAAAGCCTCTCAAAGATTTTAGAACACTTCAAACACATTACAAGAGAAAACATGGAATTAAGCCATTCATGTGTAGAAAATGCAGCAAGGCTTTTGCTGTTAGAGGAGATTGGAGAACTCATGAAAAGAATTGTGGAAAGCTTTGGTATTGTATCTGTGGTTCTGATTTTAAACACAAGAGGTCTCTTAAAGATCATATCAAAGCTTTTGGAAGTGGACATGCTGCTTATGGGTGTGATGGATTTGAAGAAGAGGATGAACCAGCTTCTGAAGTAGAGCAAGATAATGAATGA 1044 0.3908 MADNPYSNLFSSSSRFFQFNHIFPSSNSNPSPQNHHPFLHHHNNNNHTFFHYHHHISSSSPPSPPLREELPLLNLIPTKQEKYDEDQQEHEVDIQDLPCTAMDLEEREEDGSSRTTTVTVALHIGLPNPSAAEMASVLSSSNNSSEIIVTDKEHGGEDSCSGFMVNNRLNKGQYWIPTPSQILIGPTQFSCPVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCSKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGCDGFEEEDEPASEVEQDNE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2672 347 Gene3D Classic Zinc Finger 188 211 - -
Mtr7g2672 347 ProSitePatterns Zinc finger C2H2 type domain signature. 191 211 IPR013087 -
Mtr7g2672 347 PANTHER ZINC FINGER PROTEIN WIP2 4 347 IPR043584 GO:0003700|GO:0010468
Mtr7g2672 347 SMART c2h2final6 273 293 IPR013087 -
Mtr7g2672 347 SMART c2h2final6 189 211 IPR013087 -
Mtr7g2672 347 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 4 347 - -
Mtr7g2672 347 SUPERFAMILY beta-beta-alpha zinc fingers 255 293 IPR036236 -
Mtr7g2672 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 189 216 IPR013087 -
Mtr7g2672 347 SUPERFAMILY beta-beta-alpha zinc fingers 185 211 IPR036236 -
Mtr7g2672 347 Pfam Zinc finger, C2H2 type 189 208 IPR013087 -
Mtr7g2672 347 Gene3D Classic Zinc Finger 251 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2672 Mtr-Chr7 43434010 43436606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2672 4 347 C2H2 Transcription Factor Family AT3G57670 62.565 7.94e-143 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g2672 zf-C2H2 0.0043 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2672 - - gmx:100802907 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2672 7 43434010 43436606 Mtr7g2672 7 43434010 43436606 ECH
Mtr7g2672 7 43434010 43436606 Mtr1g1734 1 24219942 24223854 PCT