Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2662 ATGATGGATAATTCCAAGAAATCCCCCTTGAAACCATGGAAGAAAGGGCCAACCAGAGGCAAAGGTGGCCCTCAAAATGCTTCGTGTGAGTATCGAGGTGTTCGTCAAAGAACATGGGGGAAATGGGTTGCTGAGATAAGAGAGCCAAAGAAAAGAACCAGACTCTGGCTTGGTTCTTTTGCCACGGCTGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTATGGACCAGATGCATACCTTAATCTTCCACACATGCAAACACACTCCAATTCAACTATGAAAACTGGAAAGTTCAAGTGGTTGCCTTCAAAGAATTTCATTTCAATGTTTCCTTCTTGTGGATTACTCAATGTAAACGCTCAACCTAGCGTTCATTTGATCCATCAGAGGCTACAAGAGTTTAAGCAGAATGCAGTTGTTGCAAGTCAATCATCATTTTCTAGTTCATCTAATGATCCAAAGGCAGAAGAAATTCAGAAAGTAGACAGCAAGAAGAGTCATACAGAAGATCCTTTGCCAAAGGAAACAATCGTTCAAACATCGGCAAATAAGATGCTTGGAGATCTTCAGGAGGAGAAACCACAGATAGACCTAAATGAGTTTCTTCAACAGATGGGAATACTGAAAGAAGGATCACACTCTGAGCAAACTGAGAGTTCAGGAAGTTCAACAGTGCATGAAGTTTTGCCAAGAGATGATAATGATCAATTAGGAATATTTTCAGACATGAGTGTTAATTGGGAGGCATTGATCGAGATGCATGAATTTGCGGGTATTGAGGAATCAGAAGCCACCCATCTTGAAGCATATGACCCGAATGACCACCTTAATTTCTCAACTTCCATTTGGGACTTTTAA 870 0.4149 MMDNSKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHMQTHSNSTMKTGKFKWLPSKNFISMFPSCGLLNVNAQPSVHLIHQRLQEFKQNAVVASQSSFSSSSNDPKAEEIQKVDSKKSHTEDPLPKETIVQTSANKMLGDLQEEKPQIDLNEFLQQMGILKEGSHSEQTESSGSSTVHEVLPRDDNDQLGIFSDMSVNWEALIEMHEFAGIEESEATHLEAYDPNDHLNFSTSIWDF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2662 289 MobiDBLite consensus disorder prediction 1 30 - -
Mtr7g2662 289 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Mtr7g2662 289 MobiDBLite consensus disorder prediction 148 179 - -
Mtr7g2662 289 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 286 - -
Mtr7g2662 289 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Mtr7g2662 289 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Mtr7g2662 289 MobiDBLite consensus disorder prediction 215 234 - -
Mtr7g2662 289 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Mtr7g2662 289 Pfam AP2 domain 29 79 IPR001471 GO:0003700|GO:0006355
Mtr7g2662 289 MobiDBLite consensus disorder prediction 215 231 - -
Mtr7g2662 289 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Mtr7g2662 289 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 2 286 - -
Mtr7g2662 289 MobiDBLite consensus disorder prediction 159 176 - -
Mtr7g2662 289 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Mtr7g2662 289 CDD AP2 29 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2662 Mtr-Chr7 43376053 43377394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2662 6 289 AP2-EREBP Transcription Factor Family AT3G57600 50.871 3.52e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2662 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2662 - - gmx:100801311 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2662 7 43376053 43377394 Mtr7g2662 7 43376053 43377394 ECH