Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2659 ATGTGCTGTGAGTCGGAGGGTTTAAAGCCTGTGCCGTCTTCGTCTCCGTCTCTATCTCCAACTTTGACACACAATTCTCAACTGAGAAACCACACCATGAATCACTTAACTATCAGTACTGAAGATTCTTTTGCGAGCCTTCTTGAGCTTGCTGCTAATAACGACGTTGAAGGGTTCAAACGATTGATTGAGTATGATCCTATGTCGGTGGATGAGGTTGGATTATGGTATGGTCGTCGCAAGGGTTCGAAGCAGATGGTCAACGAGCAAAGGACACCTTTGATGGTTGCTGCTACATATGGTAGCATTGATGTTATGAAATTGATTTTTTCTTTATCGGATGTTGATATCAACAGGCCCTGTGGCCTTGACAAGAGCACCGCTCTTCACTGTGCTGCTTCTGGTGGGGCTGAAAATGCTGTAGATGCTGTGAAGCTGCTTCTTGCAGCAGGGGCTGATCCTAATTCTGTGGATGCTAACGGGGATCGTCCGATAGATGTTATTGTTTATTCCCCGAAGCTTGAACTTGTGAAAAACAGTCTTGAGGAGCTACTTCAAATTGATGGTCCCAGTGCTGGCTCTAATCTTAGGGTGATTACAAACTCGCTTAATTCTTATTCTCCTCCTTTGTCGGCTTCGCCTGAGAACGGGTCTCCTTCTCCACCACCGGATCTTCTGTTGAAGTTAAAGTCAATTGATGTCCCTCTTTCTCCTGCTGGGTCTGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCTGATATCAAAAACAGCATATACTCAACTGATGAATTTCGAATGTATTCTTTCAAGGTTCGACCTTGTTCGCGTGCTTATTCCCATGATTGGACTGAATGCCCTTTTGTTCATCCAGGGGAGAATGCCCGGAGAAGGGACCCGAGAAAGTATCATTACAGCTGTGTCCCTTGTCCTGATTTTCGCAAGGGTGCTTGCCGGCGTGGGGACATGTGTGAATATGCTCATGGGGTTTTCGAGTGCTGGCTGCATCCTGCACAATATAGAACCCGTCTCTGCAAGGACGGGACAAATTGCTCCAGGAGAGTTTGCTTCTTTGCCCACACTCCTGAAGAGCTTCGGCCATTGTATGTTTCAACTGGTTCTGCGGTTCCCTCACCTCGGTCAAGCACGTCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTGCCTGGCTCACCTTCTTCGATGTCTGTCATGTCTCCTTCGCCATTCACTCCACCCATGTCACCTTCTGGCAATGGCATTTCACACAATTCCGTTGCTTGGCCACAGCCAAACATCCCAGCGTTGCATCTTCCTGGAAGTAATCTTCAGTCTAGTCGTTTGAGATCTTCTCTCAATGCTAGAGATATTCATATGGATGATTTTGAGTTGTTATCTGATTATGATCAACAGCAACAACTCCTTAATGAGTTGGCATGCCTGTCTCCACGTCATATTAATTCTAACAGTCTTAGCCGCTCCGGTCGAATGAAGCCATTGAATCCATCAAATCTTGATGATCTCTTTTCTGCCGAGAGTTCTTCTCCTCGATATGCTGATCCAAATCTGACTTCAACCGTTTTTTCTCCGACTCACAAATCAGCTGTCTTTAATCAGTTTCAGCAGCAGCAGAACATGTTGTCACCAGTGAATACAAATTTTTCTTCTAAAAATGTTGATCATCATTTATTGCAGGCAGCTTCTTATGGTGTTCAGCCATCAGGAAGAATGTCTCCACGAAACGTGGAACCTATCTCTCCGATGGGCTCAAGGATGTCAATGCTGGCACAACGCGACAAGCAGCAACAATTCCGTAGCCTAAGCTTCCGCGAGCACGGCTCTAACTCTATGCTTGCAACTGCTGGCTCTGTCAATAATTCTTGGTCAAAATGGGAATCCCCCAATGGTAAGTTGGATTGGGCTCACAATGCGGATGAAGTTGGCAAGCTCCGTAGATCATCTTCATTTGAGCTTGGGAACAACGGCGAGGAGCCTGATTTATCATGGGTGCAGTCACTTGTCAAAGAATCTCCAACTGAGATCAAAGAGAAATTGGCAACTTCTATCTCAGGTGCTGCGCCAGGTGGATCCTCGGGTGAGGGAATGAATATGAGCACGCAACTGGAGTCTGTTGATCATGCTGTATTGGGAACATGGCTTGAACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGA 2205 0.4621 MCCESEGLKPVPSSSPSLSPTLTHNSQLRNHTMNHLTISTEDSFASLLELAANNDVEGFKRLIEYDPMSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDVMKLIFSLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGADPNSVDANGDRPIDVIVYSPKLELVKNSLEELLQIDGPSAGSNLRVITNSLNSYSPPLSASPENGSPSPPPDLLLKLKSIDVPLSPAGSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSGNGISHNSVAWPQPNIPALHLPGSNLQSSRLRSSLNARDIHMDDFELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNLDDLFSAESSSPRYADPNLTSTVFSPTHKSAVFNQFQQQQNMLSPVNTNFSSKNVDHHLLQAASYGVQPSGRMSPRNVEPISPMGSRMSMLAQRDKQQQFRSLSFREHGSNSMLATAGSVNNSWSKWESPNGKLDWAHNADEVGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKLATSISGAAPGGSSGEGMNMSTQLESVDHAVLGTWLEQMQLDHLVAQQN* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2659 734 ProSiteProfiles Zinc finger C3H1-type profile. 309 331 IPR000571 GO:0046872
Mtr7g2659 734 PANTHER UNKEMPT FAMILY MEMBER 33 731 IPR045234 -
Mtr7g2659 734 SMART c3hfinal6 304 330 IPR000571 GO:0046872
Mtr7g2659 734 SMART c3hfinal6 339 362 IPR000571 GO:0046872
Mtr7g2659 734 ProSiteProfiles Ankyrin repeat profile. 124 159 IPR002110 GO:0005515
Mtr7g2659 734 Gene3D - 20 213 IPR036770 -
Mtr7g2659 734 SUPERFAMILY Ankyrin repeat 47 178 IPR036770 -
Mtr7g2659 734 ProSiteProfiles Ankyrin repeat region circular profile. 124 158 - -
Mtr7g2659 734 PANTHER ARM REPEAT CCCH-TYPE ZINC FINGER PROTEIN 33 731 - -
Mtr7g2659 734 Gene3D - 305 367 - -
Mtr7g2659 734 Pfam Ankyrin repeats (3 copies) 50 158 IPR002110 GO:0005515
Mtr7g2659 734 MobiDBLite consensus disorder prediction 1 21 - -
Mtr7g2659 734 SMART ANK_2a 89 119 IPR002110 GO:0005515
Mtr7g2659 734 SMART ANK_2a 124 156 IPR002110 GO:0005515
Mtr7g2659 734 SMART ANK_2a 42 72 IPR002110 GO:0005515
Mtr7g2659 734 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 309 329 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2659 Mtr-Chr7 43320741 43324460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2659 41 727 C2H2 Transcription Factor Family AT5G12850 54.225 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr7g2659 Ank_2 2.4e-09 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2659 7 43320741 43324460 Mtr7g2659 7 43320741 43324460 ECH