Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2651 ATGGGGACTCCTGAATTCCCAGATCTAGGCAAGCATTGTTCTGTTTCTGATTGCAGACTCATCGATTTTTTGCCCTTCACTTGTGATCGTTGCAATCAGGTATATTGTTTGGGGCACCGAAGTTATATTGAGCATAATTGTACAAAACCCAACAAACAAGATGTCACCGTTGTTATATGTCCACTTTGTGCTAAAGGGGTTCGCCTAATTCCAGACCAAGATCCAAACATAGTTTGGGAGCATCATGTCAACACAGACTGTGATCCATCAAATTATGAAAAAGCCACAAAGAAGAAAAAGTGTCCTGTCCCAGGATGCAGAGAGACCTTAGTATTCTCAAACACAATCAAGTGTAGGGACTGTGAGGTTGACCATTGTTTGAAGCACAGGTTTGGACCTGATCACAAATGTCCTGGACCCAAAAAGTTGGAAACAAGTTTTTCATTTATGAGTCTTTGGAATATGAGTAGTGGTAAAGAAGTGTCAAAACCCAATTTATCTTCAACCACATCATCTAAGTGGACTTCAAGCCTTCTTGACATGGCTTCTAAATTGAGTGGAATAGGACAGAGCAGTGGCAGCGGTACTAGTAATAATCAACTGGAGAAGTGTCCACTATGTGATGCTAAGTTTTCCTCAGCCGCTAGTTTGGTGGATCATGCAAAAAAAGTTCACCAAAGGAGTGGTGGCAACCAATATGGGGCAAAGAAGGTGTCAATTTCTGCATGCCCCAAGTGCAGTAAAGGTTTTTTGGACCCAGTTTCCCTTGTAGAGCATGTTGAGAGGGATCATGGTGGTTGCTCTTGA 807 0.4226 MGTPEFPDLGKHCSVSDCRLIDFLPFTCDRCNQVYCLGHRSYIEHNCTKPNKQDVTVVICPLCAKGVRLIPDQDPNIVWEHHVNTDCDPSNYEKATKKKKCPVPGCRETLVFSNTIKCRDCEVDHCLKHRFGPDHKCPGPKKLETSFSFMSLWNMSSGKEVSKPNLSSTTSSKWTSSLLDMASKLSGIGQSSGSGTSNNQLEKCPLCDAKFSSAASLVDHAKKVHQRSGGNQYGAKKVSISACPKCSKGFLDPVSLVEHVERDHGGCS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2651 268 Gene3D - 81 148 IPR035896 -
Mtr7g2651 268 SMART c2h2final6 241 264 IPR013087 -
Mtr7g2651 268 SMART c2h2final6 202 225 IPR013087 -
Mtr7g2651 268 SUPERFAMILY AN1-like Zinc finger 93 143 IPR035896 -
Mtr7g2651 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 241 268 IPR013087 -
Mtr7g2651 268 ProSitePatterns Zinc finger C2H2 type domain signature. 204 225 IPR013087 -
Mtr7g2651 268 SUPERFAMILY AN1-like Zinc finger 4 59 IPR035896 -
Mtr7g2651 268 PANTHER ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 1 186 - -
Mtr7g2651 268 PANTHER ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 186 268 - -
Mtr7g2651 268 Pfam AN1-like Zinc finger 13 51 IPR000058 GO:0008270
Mtr7g2651 268 Pfam AN1-like Zinc finger 101 141 IPR000058 GO:0008270
Mtr7g2651 268 Gene3D Classic Zinc Finger 195 267 - -
Mtr7g2651 268 Gene3D - 2 58 IPR035896 -
Mtr7g2651 268 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 186 268 - -
Mtr7g2651 268 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 1 186 - -
Mtr7g2651 268 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Mtr7g2651 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 202 225 IPR013087 -
Mtr7g2651 268 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Mtr7g2651 268 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Mtr7g2651 268 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Mtr7g2651 268 ProSitePatterns Zinc finger C2H2 type domain signature. 243 264 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2651 Mtr-Chr7 43201192 43203046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2651 1 268 C2H2 Transcription Factor Family AT2G41835 58.007 1.11e-111 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g2651 zf-AN1 3.1e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2651 7 43201192 43203046 Mtr7g2651 7 43201192 43203046 ECH
Mtr7g2651 7 43201192 43203046 Mtr1g1706 1 23187013 23191641 PCT