Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2644 ATGAGAGGCAAATGTCCCCGCAGAAAGGTGAAGAAGAGAATATTATCTCACAAATCTGATCGCAGTACGAGATTACCGATCAAAGGTGATGACACGGTGTTCCTCCCCGATGAACTTGTCACTGAAGTTCTTTCATTTTCTGATGTTAAATTCCTTATGCAAATGAGGTGTGTATGCAAATCTATAATTTCCGATCCTATCTTTGTGAAACTCCACCTTAAGCGATCCGCAAGAAACCCTCACTTGACACTGTATTTTGAAAGATCCATTCTTTCTAGGGATTTTGGTGCTTTACCGTTCCCCGTTAGTTGTTTAATAATAGAGAACCCGTCGATCTCCCTTCCTAGTGATCCTCGTTATAGTTTAAAGGATAACGACTATGAATATGTTGTTGGTTCTTGCAATGGGTTGCTTTGTTTGCTTGGTTATAAGTCAGGTGGTGGAAAGATGTGGTTCCGTTTGTTGAACCCTGCCATGCATAAAATGTCCCCGAAGTTAGGCTATTTTCGGGGAGGTCTTATAAGTTTAAAGTACAAGTTTAAGTTTGCATTTGGTTATGATAATTCATCAGAGACTTATAAGGTTGTGATGTTAGGTTTGGATAACGTTCAAAATATAACTAGTGCGCAGGTTTTAAATTTGCGTGATGATGTTTGGAAACCTATTCAAAATTTTCCTGCGGTTCTTCTTCCTTTTTGGCATACACATCCTGGTGTGAATGATGGTGTTTATCTGAATGGCACTTTTAATTGGTTGGCACTTCGGAGTGAATTCCGTCCTCATCTTTATGATTGGAAGAACACTGATGTTAAGGACTTTGTGATTGTTTCATTTGATCTAGGAACAGAGACATACACACAGCCAATGCCTCCGTGTGGTTTTGATGAAATGTCACCTGTTGAGCCATCAATATGTATATTGATGGACTGTCTTTGCTTTTCTAATGACTATAAGAAAACTGATTTTGTTATATGGAAGATGGAAGAATTTGGAGTTGAAGAGTCTTGGACTCAACTCATTAAAGTTAGCTATGAAAATCTTCAGAGTATACGTCGTGGCTCTGTTGACTTGGTACTTTCTAGGAATATACGTGAGTTGAATTTAGCTAAGCCTCATAATTAA 1122 0.3841 MRGKCPRRKVKKRILSHKSDRSTRLPIKGDDTVFLPDELVTEVLSFSDVKFLMQMRCVCKSIISDPIFVKLHLKRSARNPHLTLYFERSILSRDFGALPFPVSCLIIENPSISLPSDPRYSLKDNDYEYVVGSCNGLLCLLGYKSGGGKMWFRLLNPAMHKMSPKLGYFRGGLISLKYKFKFAFGYDNSSETYKVVMLGLDNVQNITSAQVLNLRDDVWKPIQNFPAVLLPFWHTHPGVNDGVYLNGTFNWLALRSEFRPHLYDWKNTDVKDFVIVSFDLGTETYTQPMPPCGFDEMSPVEPSICILMDCLCFSNDYKKTDFVIWKMEEFGVEESWTQLIKVSYENLQSIRRGSVDLVLSRNIRELNLAKPHN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2644 373 Pfam F-box associated 242 351 IPR006527 -
Mtr7g2644 373 PANTHER CYCLIN-LIKE F-BOX, F-BOX PROTEIN INTERACTION DOMAIN 33 347 - -
Mtr7g2644 373 PANTHER OS02G0783600 PROTEIN 33 347 - -
Mtr7g2644 373 SUPERFAMILY F-box domain 27 85 IPR036047 GO:0005515
Mtr7g2644 373 TIGRFAM F_box_assoc_1: F-box protein interaction domain 132 352 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2644 Mtr-Chr7 43128327 43129448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2644 3 75 C2H2 Transcription Factor Family AT2G36930 35.714 3.83e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2644 - - mtr:MTR_7g091640 775.778