Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2630 ATGGCTTCGTCTTCCTCCGATCCAGGCAAGTCTGCGGAGACATCAGAAGCAGTGGCGGCGGCGAATGATCAGCTTTTACTGTACAGAGGATTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCTAAAGAACGAATCAGTAAAATGCCTCCGTGTGCTGCCGGTAAACGCAGCTCCATCTACCGCGGTGTTACCAGGCATAGATGGACTGGTCGTTATGAAGCACATCTATGGGATAAAAGTACATGGAATCAAAATCAGAATAAGAAAGGAAAACAAGTATACTTGGGGGCGTATGATGACGAGGAAGCAGCGGCTAGAGCGTATGACCTTGCTGCTCTGAAATATTGGGGTCCTGGGACTCTCATTAACTTCCCAGTGACTGATTATACAAGAGATCTCGAAGAAATGCAGAATGTTTCGAGAGAAGAATACCTTGCGTCTTTGCGGAGGAAGAGCAGTGGTTTTTCAAGAGGGCTATCAAAATATCGTGGACTCTCCAGTCGATGGGGGCCATCATATGGTCGAATGGCTGGATCTGATTACTTCAGTAGTATACATCATGGAGATAATTCAGCTGCGGAAAGTGAATATGTTAGTGGTTTCTGCGTAGAAAGAAAGATTGATTTAACAAATCACATCAAATGGTGGGGATCTAATAAGAATCGACACCCTGATGCTGGAACGAGATTATCAGAAGAAAAGAAACATGGTTTTGCTGGAGATATTTACTGTGAACTTAAAACATTGGAACAGAAAGTCCAACCGACAGAACCATACAAGATGCCGGAGTTAGGACCGCTGCACAATGAGAAAAAACATAAAAGTTCTTCAATCTCTGCTTTAAGTATTTTGTCAGAGTCTGCTGCTTACAAGAGCATGCAAGAGAAAGCTGCAAAAAGACAAGAAAATAGCACCGATAATGACGAGAATGAAAACAAAAATATAGTCAATGAGTTGGATCGTGGGAAGGCAGTAGAGAAACCCTCAAATCATGATGGCAGCAATAATCGACTTGACATTGCAATGGGAATGAGTGGGGCGTTGTCTCTTCAAAGAAATGTTTACCCATTGACATCATTCTTGTCTGCGCCACTTTTGACATCCTACAACACTGTTGATCCAATGGTAGATCCTGCTCTCTGGACATCTCTCATTCCCATGCTTCCTGCTGGACTTTCTCGTACATCTGAGGTTACAAAGACAGAGCCCGATTCAACCTACAATATGTTTCAGCCACAGGAGTGA 1248 0.4343 MASSSSDPGKSAETSEAVAAANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWGPSYGRMAGSDYFSSIHHGDNSAAESEYVSGFCVERKIDLTNHIKWWGSNKNRHPDAGTRLSEEKKHGFAGDIYCELKTLEQKVQPTEPYKMPELGPLHNEKKHKSSSISALSILSESAAYKSMQEKAAKRQENSTDNDENENKNIVNELDRGKAVEKPSNHDGSNNRLDIAMGMSGALSLQRNVYPLTSFLSAPLLTSYNTVDPMVDPALWTSLIPMLPAGLSRTSEVTKTEPDSTYNMFQPQE* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2630 415 MobiDBLite consensus disorder prediction 293 314 - -
Mtr7g2630 415 Pfam AP2 domain 60 118 IPR001471 GO:0003700|GO:0006355
Mtr7g2630 415 SMART rav1_2 60 132 IPR001471 GO:0003700|GO:0006355
Mtr7g2630 415 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 410 - -
Mtr7g2630 415 MobiDBLite consensus disorder prediction 320 339 - -
Mtr7g2630 415 Gene3D AP2/ERF domain 60 128 IPR036955 GO:0003700|GO:0006355
Mtr7g2630 415 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mtr7g2630 415 PRINTS Ethylene responsive element binding protein signature 108 128 IPR001471 GO:0003700|GO:0006355
Mtr7g2630 415 MobiDBLite consensus disorder prediction 320 334 - -
Mtr7g2630 415 MobiDBLite consensus disorder prediction 294 314 - -
Mtr7g2630 415 MobiDBLite consensus disorder prediction 395 415 - -
Mtr7g2630 415 ProSiteProfiles AP2/ERF domain profile. 60 126 IPR001471 GO:0003700|GO:0006355
Mtr7g2630 415 SUPERFAMILY DNA-binding domain 59 127 IPR016177 GO:0003677
Mtr7g2630 415 PANTHER BNAA03G19580D PROTEIN 8 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2630 Mtr-Chr7 42975417 42979600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2630 18 407 AP2-EREBP Transcription Factor Family AT2G41710 64.677 1.23e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g2630 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2630 K09285 - gmx:100814117 716.457