Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2628 ATGGAAGGAGTGGTTATTAGTGAGAAGGGATTATTGGAATGTGGAAGAAAGTGCACTCCATCACCCTTCTTGTTGAAGACATACATGTTGGTTGAGGATCCGATAACCGATGGTGTGATATCGTGGAACGATGAAGGAACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCTCGTGATATCCTTCCAACACTCTTCAAGCATAGCAACTTCTCTAGCTTTGTACGGCAGCTCAATACTTATGGATTTCGTAAAGTTGCAACAAGTAGATGGGAGTTTTGCAATGAAAGATTTAAGAAAGGTGAAAGAGAGTTACTATCCGAGATTCGGAGAAGGAAGGCCTGGAGCAACAAGCAACAACAAACGGTACAAAACCAAGATTCTGATGAAGATCAAAGATCGTCATCAACCTCATCAACTTCAGGTTACACTAATCTAGTGGATGAAAACAAGCGACTCAAGAAGGAAAATGTGGTGTTGAATTCTGAGCTAACAAGCATGAAAAGGAAGTGTAAGGAACTACTTGATTTGGTCTCAATTCATACCAAAAAAATGGAAGAAGAGGAAGCTAAAGATAATGATAAAAGGCCAATGCTGTTTGGGGTGAGATTGGATGTTCAACAAGGAGAAAGAAGGATTAAAAGGACTAGAGCTGAGATTAGTGAAAACGCAAGCATTTTGTTGTCTCAATCATGCAAATAG 702 0.4103 MEGVVISEKGLLECGRKCTPSPFLLKTYMLVEDPITDGVISWNDEGTAFVVWQPAEFARDILPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNERFKKGERELLSEIRRRKAWSNKQQQTVQNQDSDEDQRSSSTSSTSGYTNLVDENKRLKKENVVLNSELTSMKRKCKELLDLVSIHTKKMEEEEAKDNDKRPMLFGVRLDVQQGERRIKRTRAEISENASILLSQSCK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2628 233 Coils Coil 143 170 - -
Mtr7g2628 233 SUPERFAMILY "Winged helix" DNA-binding domain 20 112 IPR036390 -
Mtr7g2628 233 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2628 233 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2628 233 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2628 233 Gene3D - 15 114 IPR036388 -
Mtr7g2628 233 MobiDBLite consensus disorder prediction 116 147 - -
Mtr7g2628 233 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2628 233 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2628 233 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr7g2628 233 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 6 233 - -
Mtr7g2628 233 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 233 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2628 Mtr-Chr7 42941896 42944282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2628 20 178 HSF AT2G41690 62.147 1.26e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mtr7g2628 HSF_DNA-bind 3.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2628 K09419 - gmx:100802739 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2628 7 42941896 42944282 Mtr7g2628 7 42941896 42944282 ECH