Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2615 ATGAAGACGTCGAAGTTATTCGACGGGTTTAACGTTTTCATATCGCGACACTTATTTCCACCTCATGAATTTGACACTGTTCTCAAGGCTGTTGAAGAGAACGGCGGTCAAGTTCACATCGGTTTTGATCTTTCCCGCAACGGTGAAAATGATTACCACATCATTTCTTGCCGTCAACATTATAAATTTCAAGATTTAAAATCCAAAGGCTGCAAGATGATCGGTTATAGATGTGTTCTTCAATGTGCTAAAGAAGGAAGACCTCTGCCTAGACAAGCAGCCTTCACTTGCTGCTTAACTATGGAGGCTGTCAAAATACTCGCCTATGGCTTTGATGCAGATCAGATGGTTAAGATAGATGAATTAATGATTGAAATGGGGGGAGCTCTACACACTACACCGTCATCAGATTTAAACTCTGTCATTGTGAAAAATGTTTGGGCTCCAGAGTACAAGTGGGCTTTGAATGTCCTGAAGAAACCAATAGTTAGTTATGAATGGTTAAAGCAATGCTCAGATGAGCATCAAGTTGTTCCTCAAGAGTCATATATGTTTCTTCCTTTCTCTGGGTTAAAGATCTGTGTGACTGGAATCCAAGCAGATAAGCGCAAAGAGATGGAAAAGCTTATTCTACAAAATGGTGGAAAATACTCTGCAGAACTGACAAAGAAGTGCACACATTTGATTTCTAATGCTCCTGAAGGTGATAAGCATAAGATGGCAAAACTTTGGGGACATATTAATATTGTGACAATGAAATGGTTTGATGAATCTATTGCTCAAAGAGCATGTCTGAATGAGGAGTCCTACCCTGTTCAGAGTGGATCTTTATTGTCACGTAAGGTGACTAGGAACTCAACAGCGGAGCATAGTCAGGAAAAGGATATTGGGAAAATGCAATCTGGTTCATCCTCAAGAGCCGCAGATTCAAATATACTAGTTCATTGCGCCAAGTCTTTAAATGTAGATCCTGCCGCTACACAGTCAAAACATATGTTGTCTGTTTCTAATGTTCCATTATTTGTTAAAGAGGCAGATGCTGAAGCACCTCCATTACAGACCAGCAATGAATTGAACTTTAATCGAGCTGTGGCCAATGTTTCTGAATCTGATGACGATGACCGGTATTTAGCAGATTGCAGAATATCACTTGTTGGTTTTGAAGCTTCTGAAATGGAGAAGCTAAGTAATATGGTGCGTAAAGGTGGAGGCTCCCAATGCTTGTATTTAAATGATAAGTTGACACACATAGTAATCGGGAATCCAACAGAAGTGGAAAGGGAGGATGTAGTGAGAACTGTTGCTCTAGGTGTCAATTACGCTGTTAAAACCTCTTGGCTTGAGGATTGTGATCGCGAAAAAAAACAAGTCCATGTTCTACAACGGTACAGTGCATATGATATTCTTTTTCCAAAAGGTCAGAAAAAGTTGGTGGAGGTATCCGATAGGATAAAAAAGAAGAATCTAGAAAAGAAGGAATTGACAAAAGCTCATGTTGACTTAGCACAAGTGCTGGTTGATTATGCTGCTTCTCGTAGGCTAGCTCGCACGCGTGTTTGCTTCGAGATTGTGGAATTAAAGAGACGACAAAAGGAGATGGAGATGGAGTATGTAAGAATCCACGATGACTTGAGGGAAAAGTTAGGTCCTCTTTATGGATACCAAAAGCCTAAAAATGAGTTGAAGATTGAGGCGTATAAGCTTTATGAGGAGGATTGTAAGTCTAAGGGAATAGCTGCCATCTCTAAGCATCATGAGATGGGATTTAAGAAAGCAATGGAGGCGTTTGGTGACATTGCAAAAGAGAGTTGTCGTTGTAACTTTGTTACGTACTTGAATGATCCGGTTAGAAAAGAAAACATTGAGAACCACTTCAAGGGGATGATTTTGAAGTTTCCTGGTGATAAGACTGATCCCGATGTTGCAAAATTTGTTTCTAAGTTTGTGTGA 1950 0.4 MKTSKLFDGFNVFISRHLFPPHEFDTVLKAVEENGGQVHIGFDLSRNGENDYHIISCRQHYKFQDLKSKGCKMIGYRCVLQCAKEGRPLPRQAAFTCCLTMEAVKILAYGFDADQMVKIDELMIEMGGALHTTPSSDLNSVIVKNVWAPEYKWALNVLKKPIVSYEWLKQCSDEHQVVPQESYMFLPFSGLKICVTGIQADKRKEMEKLILQNGGKYSAELTKKCTHLISNAPEGDKHKMAKLWGHINIVTMKWFDESIAQRACLNEESYPVQSGSLLSRKVTRNSTAEHSQEKDIGKMQSGSSSRAADSNILVHCAKSLNVDPAATQSKHMLSVSNVPLFVKEADAEAPPLQTSNELNFNRAVANVSESDDDDRYLADCRISLVGFEASEMEKLSNMVRKGGGSQCLYLNDKLTHIVIGNPTEVEREDVVRTVALGVNYAVKTSWLEDCDREKKQVHVLQRYSAYDILFPKGQKKLVEVSDRIKKKNLEKKELTKAHVDLAQVLVDYAASRRLARTRVCFEIVELKRRQKEMEMEYVRIHDDLREKLGPLYGYQKPKNELKIEAYKLYEEDCKSKGIAAISKHHEMGFKKAMEAFGDIAKESCRCNFVTYLNDPVRKENIENHFKGMILKFPGDKTDPDVAKFVSKFV* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2615 649 CDD BRCT_TopBP1_rpt2_like 187 262 - -
Mtr7g2615 649 ProSiteProfiles BRCT domain profile. 188 272 IPR001357 -
Mtr7g2615 649 ProSiteProfiles BRCT domain profile. 372 464 IPR001357 -
Mtr7g2615 649 Gene3D BRCT domain 27 94 IPR036420 -
Mtr7g2615 649 Gene3D BRCT domain 99 187 IPR036420 -
Mtr7g2615 649 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 7 497 - -
Mtr7g2615 649 SUPERFAMILY BRCT domain 58 185 IPR036420 -
Mtr7g2615 649 Coils Coil 477 497 - -
Mtr7g2615 649 Gene3D BRCT domain 188 274 IPR036420 -
Mtr7g2615 649 SUPERFAMILY BRCT domain 187 273 IPR036420 -
Mtr7g2615 649 ProSiteProfiles BRCT domain profile. 2 96 IPR001357 -
Mtr7g2615 649 Gene3D BRCT domain 356 464 IPR036420 -
Mtr7g2615 649 SMART BRCT_7 374 454 IPR001357 -
Mtr7g2615 649 SMART BRCT_7 185 262 IPR001357 -
Mtr7g2615 649 SMART BRCT_7 98 175 IPR001357 -
Mtr7g2615 649 SMART BRCT_7 4 86 IPR001357 -
Mtr7g2615 649 MobiDBLite consensus disorder prediction 279 304 - -
Mtr7g2615 649 SUPERFAMILY BRCT domain 367 457 IPR036420 -
Mtr7g2615 649 CDD BRCT 104 171 - -
Mtr7g2615 649 ProSiteProfiles BRCT domain profile. 118 185 IPR001357 -
Mtr7g2615 649 Pfam twin BRCT domain 191 254 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2615 Mtr-Chr7 42768372 42790688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2615 1 481 Core DNA Replication Machinery Family AT1G77320 50.826 9.47e-154 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2615 K10728 - gmx:100804966 654.44