Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2587 ATGCATCCTTGGCTTGAAAATATAGTCAATCTATGCAGGAAAAGGAAGAATGACAACATCAACATGGCTTTATTCGACCAAGACCCTCATGCAAGTTCGATTGATCTCAAAAGGCATTGCTATGGACAATTTTCCAGTGCTTTTGTTCAAGCAAATGAAGCTATGGAAGATCATAGCCAAGTTGAAGTTGCCTCTAGAAAAGCACTCTTTCTTGGAGTTTACGACGGCCATGCTGGCTTCGAAGCTTCCGTCTTCATCACTCAACACCTCTTCGACCATCTACTCAGGGCTGTGCGAGCGAATGAGAATAAAATAACTGAACCTACCCTGAGGGATGCTGTTTCTGCTACTGAAGCAGGTTTTTTGGAATATGTAGAAAAAAATTATAGGCAAAAAAATAATCTTGGAAAAGTTGGTTCATGCTGTCTTGCTGGAATTATATGGAAAAAGACGCTACATGTTGCGAATCTTGGAGATTCGCGTGCTGTAATTGGTACTATGGTTAATAATAAGATCCAAGCTGAGCAGTTGACAAGAGATCACAATTGTAAAGATGAAGCTATTAGAAAAGAACTCATGTCAGAGCATCCTGATGATACTACCATTGTGATGTATGAGAGGGAAGTGTGGCGCGTTAAAGGCATCATTACGGTTAGTAGAAGTATTGGTGATACATATTTGAAGAGGCCTGAATTTAGTTTGGACGAATCGTTCCCCAAGTTTGAAGAAGTGCCTGAACCATTTATTAGAGGCGTGTTATCAGCAGAGCCGGAGATGCGTTCTAGAGATTTAACAGAGAACGATAAGTTTCTGATATTTGCTTCTGATGGACTTTGGGATTTCTTGTCAAATGAACAAGCAGTTGAAATTGTTCAAAACAATTCAAGAAATATATGTGGAATTGCAAAAAGGCTTGTGAGTACTGTTCTAGCACAAGCGGCTGCTAATAGGAATTCTACCTATAATACCATGAAGAATGCTAATCTGGGACGTGGCGATGGGAACAGGAGGTATTTTCATGATGATATAAGTGTGATTGTTGTGTTCTTGGACAAAAAGTCGATTCTGAGGATGCCCCTACATAATTTGTCCTACAAAAGCTCATCTGCCAGACCTACAACATCAGCTTTTGCAGAGTCTGGATTAACCATGCATGGGCTGCAGAGGCTGCAGAAGACTATTAAAAACCGGTTTCAAGCAAGTTCATCGCAGGAAGGCGAGAGCTCTCAGACTCAGGACCCTGAGGGCGAGAGCTCTCAAACTCAGAGCCTTTTGGGTCAGAGTTCTCGGGCTGCTAAAGAAAAAATATACGAATAA 1317 0.4123 MHPWLENIVNLCRKRKNDNINMALFDQDPHASSIDLKRHCYGQFSSAFVQANEAMEDHSQVEVASRKALFLGVYDGHAGFEASVFITQHLFDHLLRAVRANENKITEPTLRDAVSATEAGFLEYVEKNYRQKNNLGKVGSCCLAGIIWKKTLHVANLGDSRAVIGTMVNNKIQAEQLTRDHNCKDEAIRKELMSEHPDDTTIVMYEREVWRVKGIITVSRSIGDTYLKRPEFSLDESFPKFEEVPEPFIRGVLSAEPEMRSRDLTENDKFLIFASDGLWDFLSNEQAVEIVQNNSRNICGIAKRLVSTVLAQAAANRNSTYNTMKNANLGRGDGNRRYFHDDISVIVVFLDKKSILRMPLHNLSYKSSSARPTTSAFAESGLTMHGLQRLQKTIKNRFQASSSQEGESSQTQDPEGESSQTQSLLGQSSRAAKEKIYE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2587 438 MobiDBLite consensus disorder prediction 395 429 - -
Mtr7g2587 438 SMART PP2C_4 30 348 IPR001932 -
Mtr7g2587 438 CDD PP2Cc 50 350 IPR001932 -
Mtr7g2587 438 ProSiteProfiles PPM-type phosphatase domain profile. 43 350 IPR001932 -
Mtr7g2587 438 SUPERFAMILY PP2C-like 42 351 IPR036457 -
Mtr7g2587 438 Pfam Protein phosphatase 2C 62 322 IPR001932 -
Mtr7g2587 438 ProSitePatterns PPM-type phosphatase domain signature. 70 78 IPR000222 GO:0043169
Mtr7g2587 438 PANTHER ALPHABET, ISOFORM E-RELATED 16 357 - -
Mtr7g2587 438 Gene3D - 17 357 IPR036457 -
Mtr7g2587 438 MobiDBLite consensus disorder prediction 395 438 - -
Mtr7g2587 438 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 16 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2587 Mtr-Chr7 42523147 42524930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2587 35 378 PP2C-type Phosphatase Gene Family AT5G06750 52.137 8.10e-114 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2587 K01102 - pvy:116121639 350.517