Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2579 ATGGTTGCATTCTGCCCACCTCAGTTCTCATACTCAAACATGGGATGGCTCTTAGAGGAGTTAGAGCCAGAGTCCTTAATTAGTCATAAAGAGAAGAACTATGCATCTTTAGAGTACTCGTTACCGTATCATCAATTCTCTTCACCAAAGGAACATGTTGAAATTGAAAGGCCACCATCCCCTAAACTTATGGCCAAGAAACTTAACCACAATGCTAGTGAACGTGATCGCCGCAAGAAGATTAATAGCTTGATTTCTTCACTTCGTTCACTTCTTCCCGGTGAAGATCAAACGAAAAAAATGAGCATTCCGGTAACAATTTCACGTGTCTTAAAATACATCCCTGATTTACAAAAGCAGGTGCAAGGACTTACCAAGAAAAAAGAAGAGCTTCTATCAAGAATTTCTCATCGACAAGAATATGCAGTTAACAAAGAATCACAAAGGAAGAAAATTCCAAATTACAATTCTGCTTTTGTAGTTTCAACAAGTAGGCTTAATGATACTGAGCTTGTTATTCATATTTCGTCTTATGAGGCCAACAAGATTCCTCTATCTGAGATCTTGATGTGTTTAGAAAATAATGGTCTTCTTCTACTTAACTCTTCTTCTTCTAAAACCTTTGGAGGGAGGCTCTTCTATAACTTGCATTTTCAGGTGGATAAAACTCAAAGATATGAGTGTGATGATCTGATTCAAAAGCTTTCTTCAATATATGAGAAGCAGCAAAATAATCATTTGGGCACTATGGATCAAACGATCAATAGTGTTCTGATATATTAA 783 0.3665 MVAFCPPQFSYSNMGWLLEELEPESLISHKEKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHISSYEANKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLIQKLSSIYEKQQNNHLGTMDQTINSVLIY* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2579 260 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 241 IPR015660 GO:0003700|GO:0006357
Mtr7g2579 260 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 241 - -
Mtr7g2579 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 117 IPR011598 GO:0046983
Mtr7g2579 260 Coils Coil 114 134 - -
Mtr7g2579 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 137 IPR036638 GO:0046983
Mtr7g2579 260 SMART finulus 71 123 IPR011598 GO:0046983
Mtr7g2579 260 Pfam Helix-loop-helix DNA-binding domain 66 118 IPR011598 GO:0046983
Mtr7g2579 260 Gene3D - 60 151 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2579 Mtr-Chr7 42449937 42452194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2579 1 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.245 5.55e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g2579 HLH 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2579 - - gmx:100803424 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2579 7 42449937 42452194 Mtr7g2579 7 42449937 42452194 ECH