Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2570 ATGGGAATGGCTGCAGAGTCACAGTTTCATGTTTTGGCTGTTGATGACAGTATCATAGATAGGAAGCTTATTGAGAGACTTCTCAAAACCTCTTCATATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTTTGGGTTTGTGTGAGAATGATGAGACCAACCCAAATACACCATCTGTATTTCCTAACAATCATCAGGAAGTGGAGGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGAATCATCATCATTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTTCCTTCAAGGATTAATAGATGCTTGGAGGAAGGAGCAGAAGAGTTTTTCTTGAAGCCTGTTAGGTTATCAGATTTAAACAGACTTAAACCTCACATGAAGAAAACCAAATTGAAAGATCAAAATCAAGAAACAGAACAAAAAATAGAAAATTCAGAAATTCTTGAAAATGAAGAACAGCATCAAGCATCAAAATCTCAACATTCACATTTAGAGTCAGAGTCACAAACACAGACACAGTTACAAGCACATTCAACTATAGATCAACAGCAACAGTCACTACAACAAGCCAACAATAACAAGAGAAAGAGTGTGGAACAAAGTCTTTCATCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATTGCTACTGTTGTATGA 720 0.3694 MGMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNRLKPHMKKTKLKDQNQETEQKIENSEILENEEQHQASKSQHSHLESESQTQTQLQAHSTIDQQQQSLQQANNNKRKSVEQSLSSETDRTRPRYSGIATVV* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2570 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 235 IPR045279 GO:0009736
Mtr7g2570 239 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Mtr7g2570 239 Gene3D - 10 233 - -
Mtr7g2570 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 235 - -
Mtr7g2570 239 Coils Coil 199 219 - -
Mtr7g2570 239 CDD REC_typeA_ARR 11 141 - -
Mtr7g2570 239 Coils Coil 147 174 - -
Mtr7g2570 239 MobiDBLite consensus disorder prediction 181 218 - -
Mtr7g2570 239 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Mtr7g2570 239 MobiDBLite consensus disorder prediction 169 239 - -
Mtr7g2570 239 SUPERFAMILY CheY-like 8 153 IPR011006 -
Mtr7g2570 239 SMART REC_2 9 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2570 Mtr-Chr7 42347935 42350441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2570 1 239 Response Regulator Gene Family AT3G57040 63.786 2.14e-101 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr7g2570 Response_reg 1e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2570 K14492 - gmx:100814494 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2570 7 42347935 42350441 Mtr7g2570 7 42347935 42350441 ECH