Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2557 ATGTATGAATTCTTCTGCCACTCTTCACTCATTCAATTGCACCCTCTGACTTCAAACCGCTATACATCAGAAATTCTTATTGGTCCTTCTGATTGGGAAGACTATTCCAAAGAAAAGGAAGGATCTACCAGATACAGGATTCACAACCTTCCTCAGAAATTGGGTCCGGGGGTGTACGAGCTTGGAGTAGCTGTGTCGCGTAGTAATCTGGGCCGTGAAATTTACAAGCTTTCCACTGACCCTCGTCGTATAGTTGTGGTTTACCTTGGAAAAGCTGACAATGTGAGAGCAAGACTCCAGCGTTATGGCAGGAATGGAGCTCATTTGAGTAACACTTGTATGTCAGATGACTCTTCTCTGCGAACGGGAAGGTCATTGTTTCAGGAGATATTTTCACAAGGCTTCCCAATTGTTTATAGATGGGCTCCTATGCAAAATGAGGGAGATGCCCTGAGAACAGAATCACAGCTGCTTAGTACATTTGATTATGCATGGAACACAATCAGTAATGGTACAAGGCGGCCTGATGATATTCATCAAATGCTCAACAAATTAGCCTCAGGCACTAGAACATTTTCAGATGTAGCCAAATTGATTCTACCCTTCACCCAGAAAAAAGTGGGGATACCAATTAAATCAAGCAAACTGCATCTGACAGATGACAAATTAGATGAAGCTGACAGTGGCAGCTATAATGTCCTATCCCGTGTGTTCAAATTCAACAGGTCACGTCCTAGGATAGTTCAGGATACCACTGTTGGTAGTGCCACTAATGAGAATGCTAAAATTTGCGGAGTGATGTTGACCGACGGTTCTATTTGTAAAAGGCCACCGGTTGAAAAAAGAGTGAGGTGTCCTGAACACAAAGGAATGAGAATAAATGCGTCCACCACCAAAGCAATCAGATCACCCAAGTCAGAATTAGAAAGCATTGTACGTAATGCTTATAGGTACCAAAATGCCAGCCATGATGTAGAAGACCCTCCTCAAAGAACGGTTAAGTGTCATGTTGAGGAGGGTATCACCAAAACCATTATCTGTGGAATCATCTTGGATGATGGATCTACTTGTAGAAGACAACCGGTTAAAGGAAGAAAAAGGTGCCAGGAACATAAAGGGAGGAGAATTCGTGCAAATTAG 1140 0.4272 MYEFFCHSSLIQLHPLTSNRYTSEILIGPSDWEDYSKEKEGSTRYRIHNLPQKLGPGVYELGVAVSRSNLGREIYKLSTDPRRIVVVYLGKADNVRARLQRYGRNGAHLSNTCMSDDSSLRTGRSLFQEIFSQGFPIVYRWAPMQNEGDALRTESQLLSTFDYAWNTISNGTRRPDDIHQMLNKLASGTRTFSDVAKLILPFTQKKVGIPIKSSKLHLTDDKLDEADSGSYNVLSRVFKFNRSRPRIVQDTTVGSATNENAKICGVMLTDGSICKRPPVEKRVRCPEHKGMRINASTTKAIRSPKSELESIVRNAYRYQNASHDVEDPPQRTVKCHVEEGITKTIICGIILDDGSTCRRQPVKGRKRCQEHKGRRIRAN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2557 379 Pfam GIY-YIG domain-containing protein 24 178 - -
Mtr7g2557 379 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 25 378 - -
Mtr7g2557 379 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 25 378 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2557 Mtr-Chr7 42220301 42224135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2557 24 378 HRT Transcription Factor Family AT5G56780 40.548 1.20e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Mtr7g2557 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2557 - - lang:109350609 443.351