Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2554 ATGTCCCTTGAAGACTCACTAAGATCTCTTTCTTTAGACTACTTAAACCTTCTCATCAACGGACAAGCGTTCAGCGACGTTGTTTTCAGCGTCGAAGGACGTTTAGTCCACGCACACAGATGCATCTTAGCAGCAAGAAGTCTATTCTTCAGAAAATTCTTTTGTGGGCCAGACCCACCTTCTGGATTAGACCCATCAGGAAACCGAGTCAACCCATCCGGTTCAGCTAGGTCTGGTGTTATACCAGTTAACTCTGTTGGATATGAGGTTTTCTTGTTGATGCTTCAGTTTCTGTACAGTGGACAAGTTTCTATTGTTCCTCAGAAACATGAACCTAGGCCTAATTGTGGTGACCGTGGTTGTTGGCATACACATTGTACTTCAGCCGTTGATCTTGCTCTTGATACTCTTGCAGCCGCTAGATACTTTGGAGTTGAACAGCTTGCATTACTCACTCAGAAACAACTAGCGAGCATGGTGGAAAAAGCCTCGATTGAAGATGTAATGAAAGTGCTCCTAGCATCAAGAAAACAAGACATGCACCAGCTATGGACCACATGTTCCCACCTTGTAGCAAAATCAGGTCTTCCTCCAGAAGTACTTGCAAAACATCTCCCTATTGATATCATAGCCAAAATCGAAGAGCTTCGCATCAAAACCTCCTTATCACGCCGCTCCTTAATGCCTCACCACCATCATCCTCACCATCACGATCATCTCACCGCTGCAGCCGACCTTGAAGACCAGAAAATCCGTCGGATGAGACGTGCCCTCGACTCCTCAGACGTTGAACTAGTGAAACTCATGGTAATGGGAGAAGGCCTAAACCTCGATGAAGCATTGGCATTACCTTATGCCGTTGAGAATTGCAGTAGAGAAGTTGTGAAAGCCTTATTGGAACTCGGTGCAGCCGATGTTAACTTCCCGGCTGGTCCAACCGGTAAAACCCCGCTTCACATTGCAGCGGAGATGGTCTCACCGGATATGGTGGCTGTTTTGCTCGACCACCACGCTGACCCAAATGTGAGAACAGTTGATGGTGTTACACCATTGGACATTCTAAGAACCCTAACTTCGGATTTTCTATTCAAAGGTGCTGTCCCTGGATTAACTCACATTGAACCAAACAAACTAAGGTTGTGTTTGGAACTTGTTCAATCTGCAGCTCTTGTTATGTCGAGGGAAGAAGGAAATAACAACAATAGTAATAATAATAATAATGCAACAGCTTCTTCAGCAACAAATATGTATCCTCATCATAATATGAATGAAGATCACCACCATAGCCACAACAACAATAACATGGATTCAAGGTTGGTGTATCTTAACCTTGGTGCTAATACTCAAATGAGTACTTCCAGAATGGATTCTGGTGATGATGATAATACTCACAGGGAAGCTATCAACAACTCCATGTATCATCATCACTCTCATGGTCATGACTACTAA 1449 0.4396 MSLEDSLRSLSLDYLNLLINGQAFSDVVFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPSGNRVNPSGSARSGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEPRPNCGDRGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIIAKIEELRIKTSLSRRSLMPHHHHPHHHDHLTAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALPYAVENCSREVVKALLELGAADVNFPAGPTGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVMSREEGNNNNSNNNNNATASSATNMYPHHNMNEDHHHSHNNNNMDSRLVYLNLGANTQMSTSRMDSGDDDNTHREAINNSMYHHHSHGHDY* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2554 482 MobiDBLite consensus disorder prediction 395 434 - -
Mtr7g2554 482 Pfam BTB/POZ domain 16 110 IPR000210 GO:0005515
Mtr7g2554 482 MobiDBLite consensus disorder prediction 395 419 - -
Mtr7g2554 482 Pfam Domain of unknown function (DUF3420) 195 255 IPR024228 -
Mtr7g2554 482 SUPERFAMILY POZ domain 8 158 IPR011333 -
Mtr7g2554 482 Gene3D - 238 361 IPR036770 -
Mtr7g2554 482 ProSiteProfiles Ankyrin repeat region circular profile. 313 343 - -
Mtr7g2554 482 SUPERFAMILY Ankyrin repeat 272 356 IPR036770 -
Mtr7g2554 482 SMART BTB_4 25 160 IPR000210 GO:0005515
Mtr7g2554 482 Gene3D Potassium Channel Kv1.1; Chain A 4 193 IPR011333 -
Mtr7g2554 482 PANTHER REGULATORY PROTEIN NPR5 1 477 - -
Mtr7g2554 482 Pfam Ankyrin repeats (3 copies) 261 343 IPR002110 GO:0005515
Mtr7g2554 482 CDD BTB_POZ_NPR_plant 8 160 - -
Mtr7g2554 482 ProSiteProfiles Ankyrin repeat profile. 313 345 IPR002110 GO:0005515
Mtr7g2554 482 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 477 IPR044284 GO:0099402
Mtr7g2554 482 ProSiteProfiles BTB domain profile. 25 107 IPR000210 GO:0005515
Mtr7g2554 482 SMART ANK_2a 278 308 IPR002110 GO:0005515
Mtr7g2554 482 SMART ANK_2a 313 342 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2554 Mtr-Chr7 42203622 42207284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr7g2554 BTB 1.8e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2554 K14508 - gmx:100816086 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2554 7 42203622 42207284 Mtr7g2554 7 42203622 42207284 ECH
Mtr7g2554 7 42203622 42207284 Mtr1g1619 1 20472639 20476721 PCT