Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2550 ATGTCAAGAATAATCATCATGGCCAGCAACAACAGTGACAAGAACAAAGAAAAAGAGAATGATTATTTCTTAGATGCTAATGAAGATGAAACTGATATTGAAGCTGTTAACTACGATAGTGACAGTAGTAATAATAATGATGACGACGACGAAGATGATCGCATTGCTACTCATCGACCTGAATCTTTCACTTCTCAACAATGGCCTCAAAGTTACAATGAGGCTCTTGATCCATTGACAATTGCGGCTGCACCAAATATTGGATCAGTTCTAAGAGCACCAAGTGTTATTTACGCAAGCTTTGCCGCGGGTCGTTCTTCCAAGAGTTACTTGGAATTACAAGATGGTTTTCTAACTGGTACTCAAATTCAAGAATCGACATGGTGGGAGAAAGCTTCCATTCAAAAGAATATTCCTGAAGAATTGCCTATTGGTTATGGATGTACCTTCACTCAAACTATTTTTAATGGGCTTAATGTGTTGGCTGGAGTTGGGCTTCTATCTGCACCTGATACTGTGAAGCAAGCTGGGTGGGCAAGTTTGCTGGTAATAGTTGTTTTTGCAGTTGTATGTTTTTATACAGCAGAGCTTATGAGACATTGCTTTCAAAGCAGAGAAGGTATCATTAGCTACCCAGATATTGGAGAAGCTGCATTTGGAAAATATGGCCGAGTTTTTATATCAATCGTTTTGTACACCGAGTTATATTCATATTGTGTGGAATTTATCATCATGGAAGGTGATAACCTTTCTGGTCTGTTTCCTGGAACATCCTTGCATTGGGGAAGTTTAAATTTGGATGGCAAGCACTTATTTGCAATTTTGGCTGCACTTATTATTCTCCCTACCGTTTGGTTGAAGGATCTTCGTTTTGTCTCCTATCTCTCAGCTGGAGGGGTTGTTGGTACTGCTTTGGTTGGTGCTTGTGTGTATGCTGTTGGAACAAGAAAAGATGTTGGCTTCCATCACACTGCTCCATTGGTGAACTGGAGTGGTGTTCCATTTGCTTTTGGTATTTATGGGTTTTGCTTTGCGGGACATTCAGTTTTTCCCAATATTTATCAATCTATGGCTAACAAAAAAGATTTTACGAAGGCAATGCTCATATGTTTTGTTTTGCCGGTGTTTTTATATGGAAGCGTCGGAGCTGCGGGATTTCTTATGTTTGGCGAAAGGACTTCATCTCAGATAACATTGGATCTACCACGAGATGCATTTGCTTCCAAAGTCTCCTTGTGGACTATAGCAATTATCCCACTAACTAAATATGCTTTGATGATGAACCCACTGGCAAGAAGTTTGGAGGAATTGTTGCCTGATAGCATCTCACGCACTAATTGGTGCTTCCTTCTTCTCAGAACAGCATTGGTTATATCTACAGTTTGTGCTGCTTTTCTGATTCCATTTTTCGGGCTAGTGATGGCTTTAATTGGTTCTCTCCTCAGTGTACTTGTGGCAATGGTTTTGCCAGCTTTTTGTTTTCTGAAAATTGTGGGGAAAAGGGCTACAAATAAACAGGTTATTCTCAGTGTGGTAATTGCTGCATTTGGAATAGTATGTGCTTCCCTTGGAACATATTCATCTCTATTAAAGATTGTGAAGAGGAGCTGA 1611 0.3985 MSRIIIMASNNSDKNKEKENDYFLDANEDETDIEAVNYDSDSSNNNDDDDEDDRIATHRPESFTSQQWPQSYNEALDPLTIAAAPNIGSVLRAPSVIYASFAAGRSSKSYLELQDGFLTGTQIQESTWWEKASIQKNIPEELPIGYGCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLLVIVVFAVVCFYTAELMRHCFQSREGIISYPDIGEAAFGKYGRVFISIVLYTELYSYCVEFIIMEGDNLSGLFPGTSLHWGSLNLDGKHLFAILAALIILPTVWLKDLRFVSYLSAGGVVGTALVGACVYAVGTRKDVGFHHTAPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAMLICFVLPVFLYGSVGAAGFLMFGERTSSQITLDLPRDAFASKVSLWTIAIIPLTKYALMMNPLARSLEELLPDSISRTNWCFLLLRTALVISTVCAAFLIPFFGLVMALIGSLLSVLVAMVLPAFCFLKIVGKRATNKQVILSVVIAAFGIVCASLGTYSSLLKIVKRS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2550 536 Pfam Transmembrane amino acid transporter protein 149 528 IPR013057 -
Mtr7g2550 536 PANTHER OS05G0424000 PROTEIN-RELATED 40 534 - -
Mtr7g2550 536 PANTHER AMINO ACID TRANSPORTER AVT1A 40 534 - -
Mtr7g2550 536 MobiDBLite consensus disorder prediction 36 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2550 Mtr-Chr7 42128947 42134673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2550 7 471 Amino Acid or Auxin Permease AAAP Family AT2G41190 55.094 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2550 K15015 - gmx:100790344 663.299