Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2549 ATGGCCAACAACGATAAGAACAAAGAAAAAGAGAATGAATATTTTTTGGATGCAAACGAAGATGAAACCGACATTGAAGCTGTTAACTACGATAGTGACAGTAGCAATAATCGTGGCAGTTATGACGACGATGATCAACAACCTGAATCTTTCACTTCTCAACAATGGCCTCAAACTTACAATGAGGCTATTGATCCTTTGACAATTGCTGCTGCACCAAATCTTGGATCAATTCTGAGAGGACCAAGTGTTCTTTATTCAAGTTTTGTGGGTTCATTTTCATCAAAGAGTTACTTAGAATTACATGATGGAAAGACATCTTTTCTATCTGGTAATCAAATTCAAGAAGGGTTCCCAACAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGAGGAATTGCCTATTGGTTATGGATGTACCTTCACTCAAACTATATTTAATGGGATTAATATCATGGCTGGAGTTGGGCTACTATCTACACCTGATACTGTGAAGCAAGCTGGGTGGGTGAGTTTGGTGGTGATGCTTATTTTTGCAGTTGTATGCTGTTATACGGCAGAGCTTATGAGACATTGCTTTCAAAGCAGAGAAGGTATCATTAGCTACCCAGATATTGGAGAAGCTGCATTTGGAAAATATGGCCGAGTTATTATATCAATCATTTTGTACATCGAATTATATTCATATTGTGTGGAATATATCATCATGGAAGGTGATAACCTTGCTGGTCTGTTTCCTGGAACAAACTTGCATTGGGGAGGTTTAAATATGGATGGCAAGCACTTATTTGCAATTTTGGCTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTATAATCTCCTATCTCTCAGCTGGAGGGGTTATTGGTACAGCTTTGGTTGCTACTTGTGTGTTTGTTGTTGGGACAAGAAAAGATGTTGGATTCCATCACACTGGTCAATTTGTGAACTGGAGTGGCATTCCATTTGCTTTTGGTATCTATGGGTTTTGCTTTGCAGGACATTCAGTTTTCCCCAATATTTATCAGTCTATGGCTAACAAAAAAGATTTTACGAAGGCAATAATCATATGTTTTGTTTTGCCTTTTTTGTTATATGGAGGCGTCGGAGCCATGGGATTTCTCATGTTTGGTGAAGGGACTTTGTCACAAATAACATTGAATCTACCACGAGATGCATTTGCTTCCAAAGTCTCCTTGTGGACTATAGCAGTTATCCCGCTAACTAAATATGCTTTGATGATGAACCCACTGGCAAGAAGTGTAGAGGAGTTGTTGCCTCATAGCATCTCAAGCACTAATTGGTGCTTCATTCTGCTTAGAACAGCACTGGTTATATCTACAGTCTGTGCTGCTTTTGTGATTCCTTTTTTCGGGCTAGTGATGGCTTTAATTGGTTCTCTCCTGAGTGTACTTGTGGCAATCGTATTGCCGGCTTTATGTTTTCTGAAAATTGTGGGGAAAAAGGCTACAAGTACACAGGTTGTTCTCAGTGTGGTAATTGCTGCATGGGGAGTAGTATGTGCTTCCCTTGGAACATATTCATCTCTATTAAAGATTTTGCAGATAAGCTGA 1593 0.393 MANNDKNKEKENEYFLDANEDETDIEAVNYDSDSSNNRGSYDDDDQQPESFTSQQWPQTYNEAIDPLTIAAAPNLGSILRGPSVLYSSFVGSFSSKSYLELHDGKTSFLSGNQIQEGFPTTWWEKASIQMQIPEELPIGYGCTFTQTIFNGINIMAGVGLLSTPDTVKQAGWVSLVVMLIFAVVCCYTAELMRHCFQSREGIISYPDIGEAAFGKYGRVIISIILYIELYSYCVEYIIMEGDNLAGLFPGTNLHWGGLNMDGKHLFAILAALIILPTVWLKDLRIISYLSAGGVIGTALVATCVFVVGTRKDVGFHHTGQFVNWSGIPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAIIICFVLPFLLYGGVGAMGFLMFGEGTLSQITLNLPRDAFASKVSLWTIAVIPLTKYALMMNPLARSVEELLPHSISSTNWCFILLRTALVISTVCAAFVIPFFGLVMALIGSLLSVLVAIVLPALCFLKIVGKKATSTQVVLSVVIAAWGVVCASLGTYSSLLKILQIS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2549 530 Pfam Transmembrane amino acid transporter protein 143 520 IPR013057 -
Mtr7g2549 530 MobiDBLite consensus disorder prediction 1 15 - -
Mtr7g2549 530 MobiDBLite consensus disorder prediction 1 55 - -
Mtr7g2549 530 Gene3D Amino acid/polyamine transporter I 141 527 - -
Mtr7g2549 530 PANTHER AMINO ACID TRANSPORTER AVT1A 32 527 - -
Mtr7g2549 530 PANTHER OS05G0424000 PROTEIN-RELATED 32 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2549 Mtr-Chr7 42112869 42126199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2549 3 465 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.700 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2549 K15015 - gmx:100790344 704.131