Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2534 ATGCCTCACCTCATCCGTGAGAACCTCTTCATCAGCAACATCGTCGACGCCGCCGAAATTCTCCAAACCACCACCACCACCACCGTCCCCCACAACATCACCCACATCCTCTCCGTTCTCAGCTCCGCTTCCATCTCCTTCTTCTCCGAATGGCGTTCTTCCTTCTCCGTCTCTGTCAAGGAGATTTCCAAACTCCATGTCTCCGACGTCCCTACCGCCGCCAAGTCCGCTCTCTCCCCGGATAAACTTCTCTACTCGCTTGAATACGCCGGTGAAGATTTTAAGCTTGTGAGGATGGCTGTACCGCTGAGAGATACCGAGAGTGAAAATTTGTTGGATTATCTTCAAGTTTGTGTTGATTTTATTGAGAGGAGTAGGAAAGAAGGTTCTGTTTTGGTTCATTGTTTCGCCGGTGTTTCTAGAAGTGCAGCAGTTATTACGGCTTATTTGATGAAAAGCGAAAATTTGTCTCTAGAAGATGCCCTTGCATCGTTAAAGCAGAGCTGTGAATTTGTTTGCCCCAATGATGGATTTCTAGAGCAGTTGAAAATGTTTGAGGAGATGGGTTTCAAGGTTGATCAATCTAGCCTTGTATACAAGCGCTTTCGTCTAAAAATACTAGGTGAGAATCATTTCTCAGGGTCGAGGATAGACAGCTCTAAACTTGGTGCAGATCCTGGCATGCCTGTTGAAACTTCTTCAGAGGTGGGAGAAGCTACTAAAGTAGAAAATAATCGTAGCCCTGCATATCGCTGTAAGAAGTGCCGTCGTATTGTTGCATTGCAAGAACATGTTGTAGATCATATTCCTGGGGAGGGTGAGACATCCTTTGGTTGGCACAAGCGGAAAAGTGGCAATCCTTTTAACAAGTCTAATGAATCTGAGTGTTCGTCCATATTTATTGAGCCTCTACGGTGGATGAAAGATGTTGAAGAAGGCGCGTTGGAGGGAAAGCTGTCCTGTGCTCATTGTGATGCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGTGGAAGCTGGATAACACCAGCTTTTCAACTACACAAAAGTCGGGTAGATATAAGCCCTGTGTAA 1083 0.4598 MPHLIRENLFISNIVDAAEILQTTTTTTVPHNITHILSVLSSASISFFSEWRSSFSVSVKEISKLHVSDVPTAAKSALSPDKLLYSLEYAGEDFKLVRMAVPLRDTESENLLDYLQVCVDFIERSRKEGSVLVHCFAGVSRSAAVITAYLMKSENLSLEDALASLKQSCEFVCPNDGFLEQLKMFEEMGFKVDQSSLVYKRFRLKILGENHFSGSRIDSSKLGADPGMPVETSSEVGEATKVENNRSPAYRCKKCRRIVALQEHVVDHIPGEGETSFGWHKRKSGNPFNKSNESECSSIFIEPLRWMKDVEEGALEGKLSCAHCDARLGYFNWAGIQCSCGSWITPAFQLHKSRVDISPV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2534 360 Pfam Dual specificity phosphatase, catalytic domain 97 187 IPR000340 GO:0008138|GO:0016311
Mtr7g2534 360 CDD DSP_DUSP12 2 193 - -
Mtr7g2534 360 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 191 IPR029021 -
Mtr7g2534 360 PIRSF DUSP12 3 71 IPR016278 GO:0006470|GO:0008138
Mtr7g2534 360 PIRSF DUSP12 84 360 IPR016278 GO:0006470|GO:0008138
Mtr7g2534 360 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 191 IPR020422 GO:0006470|GO:0008138
Mtr7g2534 360 SMART dsp_5 1 188 IPR020422 GO:0006470|GO:0008138
Mtr7g2534 360 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 356 - -
Mtr7g2534 360 ProSitePatterns Tyrosine specific protein phosphatases active site. 133 143 IPR016130 GO:0016311|GO:0016791
Mtr7g2534 360 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 112 167 IPR000387 GO:0016311|GO:0016791
Mtr7g2534 360 Gene3D Protein tyrosine phosphatase superfamily 4 208 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2534 Mtr-Chr7 41942608 41946776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2534 92 187 Protein tyrosine phosphatase (PTP) family AT3G06110 35.052 1.58e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2534 K14819 - gmx:100776877 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2534 7 41942608 41946776 Mtr7g2534 7 41942608 41946776 ECH