Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2529 ATGCTTCAGCAACAGATTAATAATATTGGTATGGAAAACAACTCTGAACTCTTTCAATTCCTTGTTGCTAACAACCCTTCATTTTTTGAATACTCAACACCTAGTAGCACTATGATGCAACAAAGTTTCTGTAGTTCTTCTGATAACAACAATAACTATTACCACCCCTTTGAAGTTTCTGAAATTACTGATACACCCTCTCAGCAAGATAGAGCTCTAGCTGCTTTGAAGAATCACAAGGAAGCTGAGAAGAGAAGAAGGGAAAGAATTAACTCTCACCTTGACCATCTTCGTACTCTTCTCCCTTGCAACTCCAAGACAGACAAGGCTTCACTTCTAGCAAAAGTAGTAGAACGTGTGAAAGAATTAAAGCAACAAACATCTCAAATCACACAACTCGAAACAGTTCCATCTGAAACCGACGAAATAACCGTCATTTCCGCGGGCAGTGACATCTCCGGTGAAGGCAGACTCATATTCAAAGCCTCATTATGCTGCGAGGATCGCTCCGACCTAATTCCCGACCTAATTGAAATCCTCAAGTCTCTTCACCTAAAAACTCTCAAAGCTGAAATGGCCACACTTGGTGGAAGAACACGTAACGTTCTTGTTGTTGCTGCTGAGAAAGAACATAATAGCATTGAATCTATTCATTTTCTTCAGAATTCGCTTAGGTCTTTGTTGGATAGATCTAGTGGTTGTAACGATAGGTCGAAAAGGCGTCGAGGGTTGGATAGAAGAATGATGCCTTAA 753 0.405 MLQQQINNIGMENNSELFQFLVANNPSFFEYSTPSSTMMQQSFCSSSDNNNNYYHPFEVSEITDTPSQQDRALAALKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVERVKELKQQTSQITQLETVPSETDEITVISAGSDISGEGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLVVAAEKEHNSIESIHFLQNSLRSLLDRSSGCNDRSKRRRGLDRRMMP* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2529 250 MobiDBLite consensus disorder prediction 232 250 - -
Mtr7g2529 250 Gene3D - 69 135 IPR036638 GO:0046983
Mtr7g2529 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 134 IPR036638 GO:0046983
Mtr7g2529 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Mtr7g2529 250 PANTHER TRANSCRIPTION FACTOR BHLH30 13 249 IPR045847 GO:0003700|GO:0006355
Mtr7g2529 250 Pfam Helix-loop-helix DNA-binding domain 78 123 IPR011598 GO:0046983
Mtr7g2529 250 MobiDBLite consensus disorder prediction 231 250 - -
Mtr7g2529 250 SMART finulus 80 129 IPR011598 GO:0046983
Mtr7g2529 250 CDD bHLH_AtAIG1_like 69 147 - -
Mtr7g2529 250 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 13 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2529 Mtr-Chr7 41876505 41878694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2529 17 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 61.644 1.36e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g2529 HLH 6.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2529 - K22484 pvu:PHAVU_001G121200g 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2529 7 41876505 41878694 Mtr7g2529 7 41876505 41878694 ECH