Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2525 ATGGTGGAGAGAAGAAGAAAACCTCTAATTCTATGTTCCACCAAAACTGCAATCAATTCCGTATTGAAATCTTCCAATTCTTCAATCAATGAGAATGAATTCCCTAACTTCAATTTACCAGTTGGAATTCTTCGATTCTCCAACAAATTTCCTTCTTTTGATCACTCTGCACTCATTGCTCTCTCCACTTCTCTTCTCAAAACACTCTCCATTACTTCTGGTTCACCGGTTCTGGTCAAGAATGCTGAAATGAACACACAGAGGGTTGCAGTGGCCATTGCTCTTGACCCTCCGAGCAGCGACACTACTACCCTTGATATAGATCACTCACCACCTGCTTCTTCTAGAATAATGCTTGTTTTTCCTTCTTGTGATTTCCCTCTCAATGGCCCCTTGTTAAATGGTGAAATTGCTTATTTGTCTCCTCTTTTGGCCTTTAATCTTAACTTGCACATTTCATGTTTGAAATCCATTATCCACAACAGCCAAGATGCTTTGGCATCTTATTTCAAACCTCAATGTCAAGTGGGTGATGAGGATGCAGCTAAAAGCTTCGAGGATTCTGTCATTAATATAGAGTTAAAGCCTCTCGCTCAACCTCCCAGATTTGCCTCTCTTCTGAGGGTTGCTTTTGTGAAGATACCAGAATGTGGCATCCTTGATTCCATTAAACCAATTTCAGATGTTGAATCCAAAGAACGTCAAGACATGATTGACTTGGCATTGCAGAAGTACTTTGAAGTTGACAGATATTTGTCAAGCGGGGATGTTTTTGGAATTAGCATTAGTTGGAACTGTAATTCCACGATTTGCATTCCTTGTAACCAAAAAACTCAAAAGAACGAAAACATTATCTGTTTTAAGGTCATTGCTATGGAACCATCAGATGAACCAGTTCTTCGTGTCAATAAAACCTTAACTGCTTTGGTGTTAGTAGGGAGTTCCCCATCTGCCCTTCCTCCAGATTTGTTAACAACTGGACCAGAAGGGCCTGTACCTTTGCAAAGAGACACAGTGAAGATCTTAGCTTCAATACTCGCACCGACTTTATGCCCATCTGCGCTCTCTTCCAAGTTTAGAGTTTCAGTGTTATTGTATGGCTTGGAAGGTTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTCGTCGACTGGGCCTGCATGTGGTGGAATATAACTGTCATGATCTAACGGGCTCCGATAGAACATCTGTTGCTCTAGCTCAAGCTTTCAAGGCTGCTCAAAGATACTCGCCAACAATACTTCTACTTCGTCATTTTGAGGTTTTTCGAGATTCACAATCACCTGAAGTTTCACAAAATGATCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAGATTCACTGAGCCAGTTGGTGAACATGGTGATAGTAACTCCCTGGTGAAATCAAATGGTCAATTTGTGGAGAAGAATTCTGAAAAGACAAGTGGGCATCAGGTCCTGTTGATTGCTGCTGCTGACAGTTCAGAGGGTCTGCCTGCAAGCATCAGACGCTGCTTTAGCCACGAAATAAAGATGGGGCCTTTGACAGAAGAGCAAAGGGCTGAAATGCTGTTGCATTCACTGCAAAATGTTTATGGACTCCACTCTAATACTGATTTAGAGGGCTTTGTAAAAGAAATAGTTGGACAGACATCTGGTTTCATGCCTAGGGATATGTGTGCTTTAATTGCGGATGCTGGTGCCAACTTATTTCCTGGGAGCAATGTTGAAGTAGGCAAAGATCAACCCGAAGACTCGGATAGTTCTCTTATTTCCGAGGTGACGGAGGACAACAATGAGTCAGAAGTTTCAGCTCGGAAACCTGGTAAAGAAGACTTGGTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCGTCAGCATTGGGTACTCCAAAGGTTCCGAATGTAAAATGGGAAGATGTTGGCGGGCTTGAAGATGTCAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCTTGCATAAAGATCTATTCGCATCTGGGTTACGCAAGCGGTCTGGTGTTCTTTTGTACGGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGCGTGAAAGGTCCTGAACTGATCAACATGTACATAGGAGAGTCTGAGAAGAATGTTCGAGACATTTTTCAGAAGGCCAGATCAGCACGTCCATGTGTCATCTTCTTTGATGAACTTGATTCTCTTGCACCAGCTCGGGGAGCTTCCGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCGCAGATGCTTGCAGAAATTGACGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAAGTAATAGGCCAGATTTGATAGACCCAGCCCTTCTTCGCCCTGGTCGTTTTGATAAACTGTTATATGTTGGAGTTGTCTCTGATGCAACTTACAGAGAGCGGGTATTGAAAGCTCTTACTAGAAAGTTCAAATTACATGAAGATGTTTCACTTTACACTATTGCAACAAAATGTCCGCCAAACTTCACTGGTGCAGACATGTATGCCTTGTGTGCCGATGCCTGGTTCCTCGCCGCAAAGCGCAGGGTTTTGAATGCAGAGCCAGAGTCCTCCAACCCAGATAATGATGCAGACTCTATTGTTGTTGAATACGACGATTTTGTCCAGGTCTTGGAAGAACTTCAGCCTTCCCTCTCTATGGCTGAGCTAAAGAAGTACGAGCTTCTTAGAGATCAGTTTGAAGGCACCTCTAAATGA 2775 0.4252 MVERRRKPLILCSTKTAINSVLKSSNSSINENEFPNFNLPVGILRFSNKFPSFDHSALIALSTSLLKTLSITSGSPVLVKNAEMNTQRVAVAIALDPPSSDTTTLDIDHSPPASSRIMLVFPSCDFPLNGPLLNGEIAYLSPLLAFNLNLHISCLKSIIHNSQDALASYFKPQCQVGDEDAAKSFEDSVINIELKPLAQPPRFASLLRVAFVKIPECGILDSIKPISDVESKERQDMIDLALQKYFEVDRYLSSGDVFGISISWNCNSTICIPCNQKTQKNENIICFKVIAMEPSDEPVLRVNKTLTALVLVGSSPSALPPDLLTTGPEGPVPLQRDTVKILASILAPTLCPSALSSKFRVSVLLYGLEGCGKRTVVRYVARRLGLHVVEYNCHDLTGSDRTSVALAQAFKAAQRYSPTILLLRHFEVFRDSQSPEVSQNDQRGNTSEVASVIRRFTEPVGEHGDSNSLVKSNGQFVEKNSEKTSGHQVLLIAAADSSEGLPASIRRCFSHEIKMGPLTEEQRAEMLLHSLQNVYGLHSNTDLEGFVKEIVGQTSGFMPRDMCALIADAGANLFPGSNVEVGKDQPEDSDSSLISEVTEDNNESEVSARKPGKEDLVNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVVSDATYRERVLKALTRKFKLHEDVSLYTIATKCPPNFTGADMYALCADAWFLAAKRRVLNAEPESSNPDNDADSIVVEYDDFVQVLEELQPSLSMAELKKYELLRDQFEGTSK* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2525 924 ProSitePatterns AAA-protein family signature. 781 799 IPR003960 GO:0005524|GO:0016887
Mtr7g2525 924 SMART AAA_5 359 519 IPR003593 -
Mtr7g2525 924 SMART AAA_5 674 813 IPR003593 -
Mtr7g2525 924 Gene3D - 636 913 IPR027417 -
Mtr7g2525 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 918 IPR027417 -
Mtr7g2525 924 PANTHER PEROXISOME ASSEMBLY FACTOR 2 36 920 - -
Mtr7g2525 924 Gene3D - 332 537 IPR027417 -
Mtr7g2525 924 CDD AAA 662 810 - -
Mtr7g2525 924 Gene3D - 812 898 - -
Mtr7g2525 924 MobiDBLite consensus disorder prediction 577 615 - -
Mtr7g2525 924 CDD AAA 353 423 - -
Mtr7g2525 924 Pfam ATPase family associated with various cellular activities (AAA) 363 515 IPR003959 GO:0005524|GO:0016887
Mtr7g2525 924 Pfam ATPase family associated with various cellular activities (AAA) 678 810 IPR003959 GO:0005524|GO:0016887
Mtr7g2525 924 PANTHER AAA-FAMILY ATPASE 36 920 - -
Mtr7g2525 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 331 572 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2525 Mtr-Chr7 41803364 41810333 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2525 644 883 Calmodulin-binding Proteins AT3G56690 39.344 1.04e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2525 K13339 - gmx:100820183 1446.41