Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2521 ATGACCCAAATGAAGTCAGAGTCACTTGATCAGTGGAGGAGTTACTTTCGTTCATCGAATTCGGATATTTTCGATATAATTGACCATGCAATTGTTGTTGCTGCTTCTGATTGTCCAAAGGAGTTTAAGTCTAGGAGAGATGGAATTGCTGAGAGATTGTTTTCTGTTATGCTGAATCGTTGTAAGGGGTGTGAGAAGGTTGAATTGTCTGTGCCTGATGATGATAATGGTGATGAACTTTGCAAGAGAAGTTCTGTTAGAGAGGGTGCTAGCAAAGAGAGCAAGGTGGATTGCAGTAGGGAAGAAAATGGAGTGATGGATGCTAACCCTATTAGCAATTACAGCTTTGGAGAAGCTGAAGCTTTAACTGATGAACTTGAAGAGCAATCACAACTTGTTGCTGAGGTTACGAGGATTAAAGAGATTCTCAATAACCATGAAGATGAGTCTGACTCGGTGCTGTTTGAGTCTCTGAGGAGGCTTCAACTGATGCAACTCTGTGTCGATCTTCTGAAGTCAACTGAAATTGGAAAGGCTGTGAATCATCTGAGAAAGCATGGATCGAAGGATATCCGTCAACTAGCACGGACTCTCATAGATGGATGGAAAGAACTGGTCAATGCATGGGTGAAGGCGACGACAACCACACCTGTCGCAGCTTCAGAAGAAGGCACACCGGACTCCAGAAATCCATCTGTTGTTGAAAATGAAGAAGAGGAAGAAGGAGGACTTCCTTCACCTCCTTTGGACGAAGGGGCTTTCTTTGTTGCCCCAACCGGTACGATTGAACTCTCACAGTTCTTTGATGGCATGGATGACGATGGAAATATTCGAAAGAGTGCACCATTCAACAAGAACCGTGACAACGGAAGAAAGCCAGCTCTTGGCACTCAAACTAAGGACAAGAGGAATTTTCCGGCATCTAATGAAACGGCCGTCACTGCCAAGGACAACAAGAGTCAGCACATGAAGAAAAACGAGGCTGCAGCTAGGCCTAATAAACCAATGGCTGCTGATACTGGCCGTGCAAGACCGTTAAACTCGAACATTCAGCGAAAAGCCAATGTGGAGCCAAAGATGCCGCCGAAAATTGAAAACAGTACTGTCCCTAAGAGGCCTCTCAATGCTCAGCAAGATAAGTCCAAGTGTTCAGATGATTTGGCTAAGCTTGAAGCCACTAAGCGGAGACTTCAAGAGAGTTACCAACAAGCTGAAAATGCCAAGAGGCAAAGGACAATACAAGTAATGGAAATAAATGATCTTCCAAAGCAAGGATCTGTCCAACGGAATACACATTTCAAACCCGGAAATCACAATCGGCAATGGGGTAACGGTCGAAGATAG 1344 0.4449 MTQMKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEKVELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVENEEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDNGRKPALGTQTKDKRNFPASNETAVTAKDNKSQHMKKNEAAARPNKPMAADTGRARPLNSNIQRKANVEPKMPPKIENSTVPKRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRTIQVMEINDLPKQGSVQRNTHFKPGNHNRQWGNGRR* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2521 447 MobiDBLite consensus disorder prediction 420 447 - -
Mtr7g2521 447 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 125 218 IPR035441 -
Mtr7g2521 447 MobiDBLite consensus disorder prediction 216 231 - -
Mtr7g2521 447 ProSiteProfiles TFIIS N-terminal domain profile. 134 209 IPR017923 -
Mtr7g2521 447 Coils Coil 380 414 - -
Mtr7g2521 447 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 446 IPR044805 -
Mtr7g2521 447 Pfam TFIIS helical bundle-like domain 158 206 IPR017923 -
Mtr7g2521 447 Coils Coil 119 139 - -
Mtr7g2521 447 MobiDBLite consensus disorder prediction 301 316 - -
Mtr7g2521 447 MobiDBLite consensus disorder prediction 273 347 - -
Mtr7g2521 447 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 446 - -
Mtr7g2521 447 MobiDBLite consensus disorder prediction 216 252 - -
Mtr7g2521 447 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 132 214 IPR035441 -
Mtr7g2521 447 MobiDBLite consensus disorder prediction 359 384 - -
Mtr7g2521 447 CDD TFIIS_I 134 206 - -
Mtr7g2521 447 SMART TFS2_5 133 208 IPR003617 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2521 Mtr-Chr7 41745416 41749479 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mtr7g2521 Med26 4.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2521 - - gmx:100799367 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2521 7 41745416 41749479 Mtr7g2521 7 41745416 41749479 ECH