Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2517 ATGGCTTCAAGACCCATTGTTCAACAACATCAACAACCCAGAGGCGATGCTGCCTTAGGAGGAGGGAAACAGCAGAAGAAGAACGGTGCAGCAGGGGAAGGAAGGAACCGTAGACCACTTGTTGATATTGGTAATGTTGTCACACTGAAGGGTGTCGAAGTCAAGCCAAATCGCCCCGTCACTAGGAGTTTTTGTGCACAACTACTTGCCAATGCACAAGCAGCAGCAGTTGCTGAAAACAATAAGAAACAAGCTTGTGTCAATGTGGCACCTGGACCTGCTCCTCCTGTTGTTGCTGATGGAGTTGCAGCAGTGGCTAGAAGAGTGGTGGCGGCCCCTAAACCTGTTCAGAAGAAAGTCACTGCAAAACCTAAGCCTGTGGAAGTTATTGAAGTAAGTTCTGAAGAAAAGGACAATGAAGAGAAATCTGTGCACAAGAAAAAGGAAGAAGTTCATTCCAAGAAGAAACCATCACGCACTCTTTCTTCTGTCCTCACTGCTAGAAGCAAGGCTGCATGTGGTTTGACTAACAAACCAAAGGAGATTGTTGACATTGATGCTGGTGATACTAACAATGAGTTAGCTGCTGTTGAATATCTTGAAGACATATACAAGTTCTACAAGATAGTTGAGAATGAAAGCCGTCCACATGATTACATGGATTCACAACCTGAGATAAATGAGAGGATGAGAGGAATACTCATTGATTGGCTGGTAGATGTTCACTCAAAATTTGAACTTTCACCTGAAACCCTTTATCTCACAATCAACATAGTTGATAGGTTCCTTGCTGTCAACCTTGTGTCAAGAAGGGAACTTCAATTGGTTGGAATCAGTGCCATGCTGATGGCATCAAAGTATGAAGAGATCTGGCCACCTGAGGTCAATGACTTTGTGTGCCTCTCAGATAGAGCTTACAGTCATGAACAGATTCTCATCATGGAGAAAACCATCCTAGGAAAGCTTGAATGGACTTTGACCGTGCCAACACCTTTTGTGTTCCTGGTTCGTTTTATCAAGGCTGCATCAGTATCTGCAGTTCCTTCGGATCAAGGAGATTTGGAAATGATGGCTCATTTTCTCTCTGAGTTGGGAATGATGCATTATGCTACATTAAGGTATTGTCCATCAATGCTTGCTGCCTCAGCAGTTTATGCAGCAAGGAGCACATTGAGCAAGACTCCTGTTTGGAATGAGACACTCAAGATGCATACCGGTTACTCCGAAGAACAGTTGATGGATTGTGCTAGGTTGTTGGTGAGTTTTCACTCTGGTGCTGAGAATGGAAAGCTGAAGGTTGTGTATAAGAAGTACTCTGATCCTCAGAAAGGTGCTGTTGCTGCGCTTCCGCCGGCAAAGAATCTTCTGCTACCTGCTGCTGTAGGTTCTCTCAAGATTTAA 1401 0.4418 MASRPIVQQHQQPRGDAALGGGKQQKKNGAAGEGRNRRPLVDIGNVVTLKGVEVKPNRPVTRSFCAQLLANAQAAAVAENNKKQACVNVAPGPAPPVVADGVAAVARRVVAAPKPVQKKVTAKPKPVEVIEVSSEEKDNEEKSVHKKKEEVHSKKKPSRTLSSVLTARSKAACGLTNKPKEIVDIDAGDTNNELAAVEYLEDIYKFYKIVENESRPHDYMDSQPEINERMRGILIDWLVDVHSKFELSPETLYLTINIVDRFLAVNLVSRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTVPTPFVFLVRFIKAASVSAVPSDQGDLEMMAHFLSELGMMHYATLRYCPSMLAASAVYAARSTLSKTPVWNETLKMHTGYSEEQLMDCARLLVSFHSGAENGKLKVVYKKYSDPQKGAVAALPPAKNLLLPAAVGSLKI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2517 466 SUPERFAMILY Cyclin-like 191 326 IPR036915 -
Mtr7g2517 466 CDD CYCLIN 327 420 IPR013763 -
Mtr7g2517 466 MobiDBLite consensus disorder prediction 132 148 - -
Mtr7g2517 466 Coils Coil 130 150 - -
Mtr7g2517 466 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 24 459 - -
Mtr7g2517 466 Gene3D - 202 448 - -
Mtr7g2517 466 PANTHER CYCLINS 24 459 IPR039361 -
Mtr7g2517 466 Pfam Cyclin, N-terminal domain 202 326 IPR006671 -
Mtr7g2517 466 Gene3D - 216 327 - -
Mtr7g2517 466 SUPERFAMILY Cyclin-like 328 453 IPR036915 -
Mtr7g2517 466 PIRSF Cyclin_A_B_D_E 1 462 IPR039361 -
Mtr7g2517 466 Pfam Cyclin, C-terminal domain 329 451 IPR004367 -
Mtr7g2517 466 MobiDBLite consensus disorder prediction 132 162 - -
Mtr7g2517 466 SMART cyclin_7 333 421 IPR013763 -
Mtr7g2517 466 SMART cyclin_7 236 320 IPR013763 -
Mtr7g2517 466 ProSitePatterns Cyclins signature. 231 262 IPR006671 -
Mtr7g2517 466 SMART Cyclin_C_2 329 452 IPR004367 -
Mtr7g2517 466 MobiDBLite consensus disorder prediction 1 39 - -
Mtr7g2517 466 CDD CYCLIN 230 319 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2517 Mtr-Chr7 41690962 41693482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2517 1 456 Core Cell Cycle Gene Families AT4G37490 52.340 6.42e-142 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2517 K21777 - mtr:MTR_7g089080 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2517 7 41690962 41693482 Mtr7g2517 7 41690962 41693482 ECH